Puntigrus tetrazona (Sumatra barb): 122328509
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Entry
122328509 CDS
T08985
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122328509 (tfip11)
Spliceosome [BR:
ptet03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122328509 (tfip11)
Other components
Complex C specific factors
122328509 (tfip11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
122328509
NCBI-ProteinID:
XP_043080168
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Position
23:complement(11062357..11068609)
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AA seq
833 aa
AA seq
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MSMSHLYGRRGNEEEEDGVEIEKFEVTEWDLANEFNPDRRRYRQTKEEATYGIWAEHDSD
DERPSFGGKRSKDYSAPVNFVSAGLRKTAAEEKAEQEGSDDSNDSGEAPPPPRAAAPKKL
QTGGSFKTSQRFAGGIRTGQDIGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQRELGQWRKEPGTAKKKPKYSY
KTVEELKAHGKLTNRSMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLSV
STREQKTSGFSLPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHESDALQVRLAE
EEQSVGRLEQVMNLVDRFEAGDKEGTPALSLQECAKIFQQLQTEFYQEYKTLGLGDLAVS
VVHPLLKERLRSWDPLKDCSDGLEEVGQWRAILESSQSLHGGPDTSNMDPYHRLIWEVWV
PVMRSCVSQWQPRIVGPMVDCVECWAPVLPLWILDHVLEQLIFPRLQREVDSWNPLTDTV
PIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWKDVFTPGAWEA
FMVKNIVPKLALCLGELVVNPHQQVLEPFNWVMDWEGMLSVSTMVGLLDKNFFPKWLQVL
CSWLSNNPNYEEITKWYLGWKSLLSDNLLSHPLVKEKLNEALDIMNRAVASGLGGYMQPG
ARENIAYLIQTERRKDFQCEPQPERRDMDSSVTRPPGTAAAPTSVPTNFKDLVQAKAEEN
GIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtaatgaggaggaggaggatggtgtggaa
attgagaagtttgaggtgactgagtgggacttggccaatgaattcaacccggacagacgc
agatacagacagactaaagaagaagcgacttatgggatttgggcagagcatgactctgat
gatgagcggcccagctttggggggaaaagatccaaagactattcagctcccgtgaacttt
gtgagtgctggcctacgaaagactgcagctgaagagaaagcagagcaggagggttcagat
gactcaaatgatagtggagaagcacctcctccaccccgcgctgctgctcccaaaaaactc
caaacgggtggaagctttaagacgtcccaaaggtttgcaggtggtatcagaacagggcag
gacatcggatcatgggagaaacacacacgaggcatcggtcaaaaacttctgcaaaagatg
ggctacgttccaggaaaaggattgggcaaaaatgctcaaggtattgtgaacccgattgag
gcgaaagtgcggaagggcaaaggagcggtaggagcgtatggcaatgagaggacccagcag
tccctgcaggatttccctgttgtagactctgaggaggaggaagagaaagagtttcagagg
gagttggggcaatggcgtaaagaaccaggaacggcaaagaagaagcctaaatattcttac
aagactgtggaagaacttaaagctcatggcaaactgaccaacaggagcatgagcagacct
gctggagaactggctcaggttaaggtgatcgatatgacaggcagagagcagaaggtgtat
cacagttacagtcacatgagtcagaagcacagtgttcccgaggaggcccctttgagtgtg
agcacacgtgaacagaagacctctggcttctccttaccggagctggaacacaacctcaaa
ctgctcattgagctgacagagcaagacatcctacagagtgcaagacgtctacagcacgaa
aaggacactgtggtgaccctgacccacgagagcgacgcactgcaggtcaggttggcagag
gaggaacagtctgttggtcggctggagcaggtgatgaacctggtggatcgtttcgaagca
ggcgataaagagggaacccctgctctcagccttcaggagtgcgctaagatctttcaacag
ctgcagacggagttctatcaggagtataaaaccttgggtttgggagacctagctgtgtct
gtggtgcatcctttattgaaagagagacttcgcagttgggatccactgaaggactgttca
gatggtttagaagaagtcggtcagtggagagccattcttgaaagctcacaatctcttcac
ggtggcccagacacttctaacatggacccctatcacaggttaatatgggaagtgtgggtt
ccagtcatgaggagctgtgtgtctcagtggcagcccagaatcgtggggccaatggtggac
tgtgtggagtgctgggctcctgtattgcctctgtggattctggatcatgttttggaacag
cttattttcccacgactacaaagagaggtggacagttggaacccactgacagacacggtg
ccgatccattcatggattcatccctggttgcctctgatgcaaacccgtctcgagccgctg
tacgcaccaatccgcagtaaactagcccatgccctgcagcgctggcaccccagcgactcc
tctgccagactcattctgcaaccctggaaagatgtcttcacacccggtgcatgggaggcc
ttcatggtcaaaaatattgttccaaaactagctttgtgtttaggagagctggtggtgaat
cctcatcagcaagtactggagccattcaactgggtgatggactgggaaggcatgctctct
gtctccaccatggttggactgctggataagaattttttccccaaatggctacaggtgttg
tgttcctggctcagtaacaacccaaactacgaggagatcaccaaatggtatctgggctgg
aaaagtttgctctcagacaacctgctcagtcacccactggtcaaagaaaaactgaatgag
gctcttgacatcatgaatcgtgctgttgcctctggactaggtggatatatgcaaccagga
gcaagagagaatattgcgtatctgattcagacggagagaaggaaagatttccagtgcgag
cctcagcctgagcgtcgtgacatggacagttctgtgacacggccaccaggcaccgcagcg
gcaccaacatctgtacccaccaactttaaagacctagtccaggccaaagctgaggagaac
ggcatcgtcttcatgccactggtggctaaacggcatatgggcaaacagttgttcacattt
ggcagaatagtcatctacattgagcgtggagtggtctttgtccaaggcgagaaaacctgg
gttcctacatcactacagagtctgattgacatggccaagtga
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