Puntigrus tetrazona (Sumatra barb): 122328554
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Entry
122328554 CDS
T08985
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04110
Cell cycle
ptet04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122328554 (smc1a)
04114 Oocyte meiosis
122328554 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122328554 (smc1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122328554 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
122328554 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
122328554
NCBI-ProteinID:
XP_043080239
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Position
23:16494956..16505598
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AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYCEDNGDECTFTRVIIGSSSEYRINNKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTTLFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNEEEIEKLNR
ELSQRNREIEKDRKKMDHVEEELKEKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELDHEQGAVEMARQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDITELRDRMNLVEDEVFVEF
CQEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVMMWEQ
TVKKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGS
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQGEGSSQVE
DSINSPKASSSVHAKEALIEIDYSNLNEDLKDALSEEEIKAEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPND
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttaaaactgatcgagattgaaaatttcaaatcttacaaaggacgtcaaata
atcggaccgtttcacaaatttacggcaataatcggcccaaatggatccgggaagtcaaac
cttatggatgccatcagttttgtattagcagagaagaccagtaacctgcgtgttaaaacc
ctgaaggacctcatccatggagcaccagtgggaaaaccagcggccaaccgtgcctttgtg
agcatggtgtactgcgaggacaatggagatgaatgcaccttcacacgagtcatcattggt
tcctcctcagagtaccgaatcaacaacaaggtggtcgggctttcagactacagcgaggag
ctggaaaaactgggtatcctaattaaggccagaaattttcttgtgttccagggtgcagtg
gagtccatagccatgaagaatcccaaagagaggaccactttgtttgaggagatctcccgt
tctggtgagctggcccaggaatatgaccgcagaaagaaagagatggtgaaagctgaagag
gacacacagttcaactatcaccgtaagaagaacatcgcagcggagcgcaaagaagccaaa
caggagaaagaggaggctgagaggtaccagagactgaaggatgaggtggtcagggctcat
gttcagctacagctctttaaactctaccacaatgaggaggagatcgagaagctgaacaga
gagttgtctcaacgcaaccgtgagattgagaaggacaggaagaagatggatcatgtagaa
gaagagctcaaggaaaagaagaaagagctgggaagaatgatgagggatcagcagaatgtg
gagaaggagataaaagagaaagatgctgagctgaaccagaaacggccacagtatatcaag
gccaaggagaacactgcccataaaattaagaagctggaggtggctcgaaaatccttgcag
aacgcccagaagatgtacaagaagcgcaaggcagacatagaggaactggatcatgagcaa
ggtgctgtggagatggcgaggcaggagtttgaggagcggatggaagaggaggcacagagt
caaggccaagatttgacactggaggagaaccaggtgaagcagtatcacaggctaaaggag
gaggccagtaagcgggcagctactttggcacaggagctagagaagtttaaccgggaccag
aaggctgaccaggaccgactggatttggaggagaggaagaaaattgagactgaggccaaa
atcaaacagaagattcgtgagattgaggaaaaccaaaagcgcattgaaaagctggaggac
tatattgcaactagcagacagtctctggatgaacagaggcgtatggaagaggaacttact
gaggaagtggagctggccaaaagaaggattgatgagataaacatggagttaaatcaagtg
atggagcaacttggagatgctcgcattgacaggcaggagaacagccggcagcagcgcaaa
gctgaaattatggagagcattaaacggctttaccctggctcagtatatggcagactgatc
gacttatgccagcccacccagaagaagtaccaaattgcagtgaccaaagtcctgggaaaa
aacatggacgccattattgtggactctgagaaaaccggcagagattgcatccagtacatt
aaagagcaaagaggagaaccagagacctttctacctcttgactatttggaggtgaaaccc
acagatgagaaactgagagagcttaggggggcaaaactagtgatcgatgtgatccgctat
gagccgccacacataaagaaagcccttcagtatgcctgcggcaatgctttagtgtgtgag
aatgtggaggacgctcgcaggatcgcctttggaggaccataccggcataagaccgtggct
ttggatggaactctcttccaaaagtcaggtgtgatctctggtggagctagtgacctgaaa
gcgaaggctcgacggtgggatgagaaagctgtggacaaacttaaggaaaagaaagagaaa
ctaacagaggaattgaaggaacaaatgaaagcaaagagaaaggaggcagagctcaggcag
gtccaatctcaggctcacgggctgcagatgaggctgaaatattctcagagtgatctggaa
cagacaaaaacccgccacctctcactgaacatgcaggagaaatcaaagttggagagtgaa
ctggcaaattttggcccacggataaatgacatcaaacgaatcatccaatcacgagagagg
gacatcacagagttaagagaccgcatgaatctggtggaggatgaggtctttgttgaattc
tgccaagagattggtgtgcgaaatatcagagagtttgaagaagaaaaagtaaagaggcaa
aatgagattgccaaaaaacgactggagtttgagacacagaagacccgtctagccatccag
cttgattatgagaagaaccagttgaaggaggatcaggagaaagtgatgatgtgggagcag
actgtaaaaaaggatgagaatgagattgaaagacttaaaaaggaggaacacaggcacatg
aagatcattgatgagacaatggcacagttacaagacctgaagaaccagcacctcactaag
aagggagaggtaaatgacaagaaccgagagatggaggagatccgcaagaaactaggatct
gccaacaaagagctgacccagctgcagaaggaagtaactgccattgaaactaaactggaa
cagaaacgcagtgacagacacaacttgttgcaagcctgcaagatgcaggacatcaaactg
cccctcaaatcagggacaatggatgacatcagccagggcgagggaagttcacaagttgag
gattccatcaacagtccgaaggcatcaagctctgtacatgctaaagaggccctcatagag
attgactacagcaacttgaatgaggacctcaaggatgctttgtcagaagaagagatcaag
gcagagatgaacaccctacagcagaggctgaacgagcagcagagcatcctgcagagaatc
agtgctcccaacatgaaggccatggagaaactcgagagtgttagagacaagttccaggag
accagcgatgagtttgaagctgcccggaaaagagcaaagaaagcaaaacaggcctttgag
cagatcaagaaagagcggtttgaccgcttcaatgcttgtttcgagtctgttgccaccaac
attgatgagatctacaaagcactgtcacgtaacagcagtgcacaggcattcctggggcca
gagaacccagaagaaccatacttagatggaatcaactacaactgtgtggctccaggaaag
agattcaggcccatggacaacctgtctggaggagagaaaactgtggcagctttagctctt
ctttttgcaattcacagctacaagcctgcacctttctttgtcctcgatgagattgatgct
gcattggataacaccaacataggcaaggtggccaactacataaaggaccagtcagtacag
aatttccaggcaattgttatttctctgaaagaggagttctacacaaaagccgactcactc
ataggagtttaccctgagcaaggagattgtgtcatcagcaaggtgctgacctttgatctt
tcccagtatccagatgccaatcccaatcctaacgattag
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