Puntigrus tetrazona (Sumatra barb): 122328715
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Entry
122328715 CDS
T08985
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122328715 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122328715 (hnrnpa1b)
03041 Spliceosome [BR:
ptet03041
]
122328715 (hnrnpa1b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122328715 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
122328715 (hnrnpa1b)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
hnRNP proteins
122328715 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
122328715
NCBI-ProteinID:
XP_043080512
LinkDB
All DBs
Position
23:complement(18231643..18235536)
Genome browser
AA seq
389 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSSVSEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEEDH
LRDYFKQFGKIEAVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNSRGRGGGGGGGGGGGGGGGGGGNFNRYGNNGGYNNDFGGGGNRDGYFG
RGGRGGGGGGYGGDCYNNGFGGGDGNYGSGPGNYGGNRGYGGGSGGGGHGYGNQGGGYGG
GGGSSGGGYNDNYNNGNGNFGGGNFGGGGGSGGGNYNDFGNYNNQQSNYGPMKGNFGSGG
GGRNSGPYGGGYGGGSGGGYGGGSGGRRF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagggccaaccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccacagacgatagtttgcgggcgcattttgaacaatggggcacctta
acggattgcgtggtgatgaaagatccaaacaccaaacgctccaggggctttgggtttgtt
acttattccagcgtgtctgaagttgatgctgctatggatgcacgaccccacaaggtcgac
ggtaggcttgtggagcccaaacgagccgtgtctcgagaggactccaacaagccgtttgct
cacacaacggtgaagaagatatttgtcggtggcattaaagatgatactgaggaggaccat
cttcgtgactacttcaaacagtttggcaaaattgaggccgttgagataatggttgaccac
aagaccggaaacaaaagaggctttgcctttgttacatttgatgaccatgactcagttgac
cgtattgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcagaaaagct
ctgtctaaacaagagatgcagaacactggcatgaactcaagaggccgtggtggtggagga
ggaggaggaggaggtggtggcggcggtggtggaggaggaggaaacttcaacagatatggc
aataatggcggctacaacaatgactttggtggcggtggcaaccgtgatggatattttgga
agaggaggcagaggtggtggaggtggcggttatggaggtgactgctacaacaacggattt
ggtggaggagatggtaactatggtagtggccctggtaactatggtggaaaccgtggatat
ggaggtggcagtggaggaggtggacatggttatggcaaccagggtggtggttatggtggc
ggcggcggcagcagtggtggtggctataatgacaattacaacaacggcaatggaaacttt
gggggtggcaactttggaggaggtggtggcagtggaggtggtaactacaatgactttggc
aactataacaaccagcagtcaaactatggtcctatgaaagggaactttggaagtggcgga
ggtggtagaaacagtggcccatatggtggtggctatggcggtggatctggtggtggatat
ggaggcggctctggtggtagacggttttaa
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