Puntigrus tetrazona (Sumatra barb): 122328748
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Entry
122328748 CDS
T08985
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122328748 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122328748 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122328748 (srsf6a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
SR proteins
122328748 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
122328748
NCBI-ProteinID:
XP_043080587
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All DBs
Position
23:complement(1070758..1075667)
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AA seq
380 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGKLLEVDLKNGYGFVVFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDSYGGGYYGGGGGGGGGGGGGGGGGGGGGRSGYSSRSRTGRDK
YGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRR
AVEKLDGTDINGRKIRLVEDKQRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSRSR
SRSRRHRSRSRSRSKSPSSKSRSRNRKSRSRSRTQKSRSRSTSRKSRSRSDERKSRSKST
SKVKSDRGRSKEKSVTRKSRSRSASPMENGDGGHAKSASRSPSPQAEKSQYKSPDRHSRS
RSKSASRSKSRSRSRSASQD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtgtacatcggcaggttgagctatcatgtccgcgagaaagacatccagcgg
ttcttcagcggttacggaaagctgttggaggtggatctgaagaacgggtatggctttgtt
gtgtttgaggacacccgtgatgctgatgacgcagtctacgagctgaacggaaaagagctg
tgtggagagcgggtcatggtggagcacgccaggggtccgcgccgagaccgggacagctat
ggagggggttattatggtggtggaggaggaggaggaggaggaggtggtggaggtggagga
ggaggcggaggcggaggacgcagtggttacagcagcaggagtcgcaccggaagggacaag
tatggccctcctgttcgcaccgagtaccgcctcatcgtggagaatctgtcgagtcgctgc
agttggcaagaccttaaggatttcatgcgacaggcaggtgaggtgacctacgcagatgcc
cataaggagcgtgccaacgagggtgtgattgagttccgctcttactccgacatgcggaga
gccgtggagaaactggacggaacagacataaatgggaggaaaattcgtctggttgaagac
aagcagcggaggcgtcgctcctactccggcagccgttctcgttctcgtagccggcgtcgt
tctcgtagtaggagtcgccgtagcagccgctctcggagcaactcaagatctcgctcaagg
tctcgttctcgccggcaccgctcccgttccaggtctcgctccaagtctccatcaagcaag
tctcgttcgcgcaatcgtaaatctcgttctcgctcccgcacacaaaaatctcgcagccga
tcaaccagtcgcaagtcccgctcccgctcggatgagcgcaagtcccgctctaagagcact
tccaaagtgaagtcggaccgtgggcgctccaaggagaaatcggtcaccaggaaatccaga
agtagatctgcttcaccgatggagaatggcgatgggggtcatgccaagtctgcttctcgc
tctccgtcacctcaggctgagaagagccagtataagtctccagacaggcattctcgttct
cgctcgaagtctgcctcacgttctaaatcccgttcccgttccagatctgcgtcccaagat
tag
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