Puntigrus tetrazona (Sumatra barb): 122328788
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Entry
122328788 CDS
T08985
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122328788 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122328788 (rarga)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122328788 (rarga)
Nuclear receptors [BR:
ptet03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122328788 (rarga)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
122328788
NCBI-ProteinID:
XP_043080671
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Position
23:complement(18456925..18507741)
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AA seq
506 aa
AA seq
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MAANRERQVGHMTGFPPAVYPFAFNSMRSHSPFDLLTNSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEVVPPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QAESTEKKPEPEQPAPPPALLTMKKEQEDEDDSWATENGSEPSPEEEDDDDDDGEEERGT
DSDGEAWGSQEPNVDVSRKSHGGRAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaatagggaacggcaggtgggtcacatgaccggcttcccacctgctgtctac
ccctttgccttcaattccatgcggagccactcccccttcgacctgctgaccaatagtagc
ctgtttggacggtttggggcggaccttcccaaagagatggcagcgctgtcggtggagacc
cagagcaccagttcggaggagatggtgcccagctccccttctccaccacctccgccccgt
gtttacaagccctgcttcgtctgccaggacaagtcttctgggtaccactatggtgtcagt
tcttgcgagggctgcaagggtttcttccgtcgcagtattcagaagaacatggtgtacacc
tgccaccgtgacaagaactgccagatcaacaaggtcacacgcaatcgttgccagtactgc
cggctgcagaagtgcttcgaggttggcatgtccaaggaagctgtgcgcaacgatcgaaat
aagaaaaagaaggacgtgaaggatgaggttgttccaccagagagctacgagctgagtgga
gaactggaggagctggtcaacaaagtgagcaaagcacatcaagagaccttcccgtcactc
tgccagctgggaaaatacaccacaaactcaagctcagaccaccgggttcagctggacctg
ggcctatgggacaaattcagtgagctctccacaaagtgcatcattaaaattgtggaattt
gccaaacgccttccgggcttcaccaccctcaccatcgcagatcagatcaccctccttaaa
tcagcctgcttggacattctaatgctgcgaatctgcacacgatacacaccggagcaggac
acaatgaccttttcagatggactgaccctcaaccggactcagatgcataatgccggcttc
ggtccgctcactgacctggtgtttgcctttgctggtcagcttctgccccttgagatggac
gatacggaaactggcctcctcagcgccatctgcctcatttgtggagaccgaatggatctt
gaggagcctgagcgtgtagatcgtctacaggagccccttctggaagctctgaagatctat
gcacgacgccgccgacccaacaaacctcacatgttccctcgcatgttgatgaagatcact
gacctacgtggcatcagcaccaagggagcagaaagggccataactcttaagatggagatc
ccaggccccatgcctcctctcatccgagagatgctggaaaacccagaggctttcgaggat
caggccgagtccacagagaagaagcccgaacccgaacagcccgctcctccacccgccctg
ctcactatgaagaaagagcaggaggacgaggacgacagctgggccacggagaacggcagc
gagccttcaccggaggaggaggacgacgacgacgatgacggagaggaggagaggggtacc
gacagcgacggagaggcctggggcagccaggaacccaacgtggacgtgtccagaaagagc
catggaggaagagctcagtga
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