Puntigrus tetrazona (Sumatra barb): 122328926
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Entry
122328926 CDS
T08985
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122328926 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122328926 (scn8aa)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122328926 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
ATP-synt_B
IQ
GPHH
Neur_chan_memb
HpsJ
Motif
Other DBs
NCBI-GeneID:
122328926
NCBI-ProteinID:
XP_043080941
LinkDB
All DBs
Position
23:complement(15814709..15860823)
Genome browser
AA seq
1960 aa
AA seq
DB search
MAAPLLAPPGPDSFKYFTRESLCEIEKRIAEEKAKPPPKPDSSYRDDDDENKPKPNGDLE
AGKSLPFIYGDTPPGMVATPLEDIDPFYVNKKTFIVINKGKTIFRFSATPSLYMISPFNL
ARRIAIKILIHSVFSMFIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESAVKIIAR
GFCIDDFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINITEIFQANGTHAF
NWDEYIMNDTNFYFLPDQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAERKEAEFKAMLEQLKKQQEDAQANAMATSAGTVSEDVVEDDGDGGGNLSCSSSEM
SKLSSKSAKERRNRKKKWRQKEQDKEKGDSEKFVKSESDDGSRRSRFRFPDNRLGRRSSI
MNQSLLSIPGSPFPSRRNSKSSIFSRCKDGGSENEFADDEHSTVEEYDERRDSFLSPQRR
SSYTGYYGKRNSTVDCNGVVSLIGPGPGGRLLPEVIIDKAATDDSPTTDLEIKKKLSGSL
MVSVEQLNASFGRKERANSVMSALTNTLVEELEESQRKCPPCWYKFANTFLIWECGPVWM
RVKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDNFNHVLSVGNLVFTGIFTAEM
FAKLVAMDPYYYFQEGWNIFDGFIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIASDCELPRWHMN
DFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADNLAASDDDGEMNNLQIAVIRIKKGIAWVKVKVRELVNIILRRKVTDEAKPLDDMYDR
KLNCITNHTGVDISRDLDYQKNGNGTTSGIGSSVGKYMIDDDHMSFIHNPNLTVCVPIAV
GESDFENLNTEDFSSESEAEGSKELDDISSSEGSTIDIKPEVEEAVVVEAVEEYVDPEPC
WTEGCVARYKCCDVPITEGWGKSWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDV
YIEQRKTIRIILEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLI
ANALGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLI
FSIMGVNLFAGKYYYCYNATEKAMFEIDVVNNRSECQALINDNYTEVRWRNVKINFDNVG
AGYLALLQVATFKGWMDIMYAAIDSRKVEDQPKYEDNIYMYIYFVIFIIFGSFFTLNLFI
GVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKLQGMVFDFVT
QQVFDISIMILICLNMVTMMVETDDQSQETENILYWVNFIFIVAFTSEFVLKLFALRHYY
FTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTL
LFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKRESGIDDLYNFETFGNSMICLFM
ITTSAGWDGLLAPILNYPPDCDPNKENPGTTVKGDCGNPSVGIFFFVMYIIVSFLIVVNM
YIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPTASQFITFAKLGDFADTLEHPLR
VPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPSK
VSFEPITTTLRRKQEHMSASVIQRAYRAYLIRRGFICKRLLSSSRLENGGTNQDKKEGTP
STASLPSYDSVTKPEKENLDESDSKGKKGKNQKEVKESKC
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgacagcttcaaatactttaccagggaa
tctctgtgtgaaatcgagaagcgcattgctgaggagaaagccaagccgccacctaaacca
gacagcagctaccgcgacgatgacgacgagaacaagcccaagcctaacggtgacctggag
gcgggcaagagtctgcccttcatctacggggacacccctcctggaatggtggcaacacca
ttggaagatattgatcccttctacgtgaataagaaaacatttatagtcataaataaaggg
aaaacaatcttccgctttagtgccacaccttccctgtacatgataagcccttttaatctc
gctaggcgaatagcgattaaaattttgatacattcagtgttcagcatgttcattatgtgt
acgattttgaccaactgtgtgttcatgacttttagtaatcctcccgagtggtccaaacaa
gtagagtataccttcactggaatttatacgtttgaatcagctgtaaaaatcattgcccgt
ggattctgtatagatgacttcacattccttagagatccatggaactggctggatttcatg
gtcatctcaatggcatatgtaacagagtttgtggacctggggaatgtatctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcattccaggtctgaagaccatt
gttggcgctttgatccagtcggtgaagaagctgtcagatgtgatgatcctcaccgttttc
tgcctcagtgtctttgccctcattggtctgcagctcttcatgggaaatctgcggcaaaag
tgtgtcatctggcccatcaacatcacagaaatattccaggccaatggcacccatgcattc
aactgggatgagtacatcatgaatgataccaatttctacttcctgccagaccagctggat
gctcttctgtgtggaaacagctctgattcaggtcgctgtcctgaaggctacacatgcatg
aaggctggtcgcaatccaaactatgggtacaccagctttgacagttttggctgggctttc
ctggctctattccgcctcatgacgcaagacttttgggagaacttgtaccagctgaccctg
agagcagcggggaagacctacatgattttctttgtgctggtgatctttgttggctcattc
taccttgtgaatttgatcctggctgtggtggccatggcatatgaagaacagaaccaggcc
actatggaagaggcggagcgaaaggaggcggagtttaaagccatgctggaacagctgaag
aaacagcaggaggatgcacaggctaatgcaatggcgacatcggcggggacggtgtctgag
gacgtggtggaggatgatggtgatggaggtgggaacttgtcctgcagctcatctgagatg
tctaagctcagctccaagagtgccaaagagagacgcaaccgcaagaagaagtggcggcag
aaagagcaggacaaggagaaaggggacagtgagaagtttgtcaaatctgaatcagatgat
ggaagcaggaggagcagatttcgtttccctgacaaccgtttaggacgtaggagttctata
atgaaccagtctctgctcagcatcccaggttcaccattcccttcaagacgcaacagtaag
agcagcatcttcagccgctgtaaggacggaggctcggagaatgagtttgcagatgatgaa
cacagcacggttgaggagtatgatgagcgacgcgattcgttcttaagcccacaacgtcgc
agcagctacacgggttactatggcaagcgcaacagcactgtggattgcaatggagtggtc
tctctcatcgggccgggccctggcggacgcctactgcctgaggtgataatagataaggca
gccactgatgacagcccaaccactgatctcgaaatcaagaagaaactctcaggctctcta
atggtttctgtagagcagcttaacgcatcgtttgggcgcaaggagcgagctaacagtgtc
atgagtgcgcttaccaacacattggttgaggaattggaagagtctcagaggaagtgtcca
ccatgctggtacaaatttgccaacacgtttcttatctgggagtgcggccctgtttggatg
agggttaaggagatcgtgaacctgatcgtgatggacccttttgtagatttggctatcact
atctgtattgtgctgaatactctctttatggccatggagcattaccctatgacggataat
tttaatcatgtgctgtctgtcggaaacctggtgtttactggtatcttcactgccgaaatg
tttgccaaactggttgcaatggacccatactactatttccaggaaggctggaatattttt
gatggctttatcgtgagcttgagtttaatggagttgggcttggctgatgtagaaggtctt
tctgtgctgagatcattccgattgctgagagttttcaaactggctaagtcatggcccacc
cttaacatgctgataaagatcatcggcaactcggtgggagctttaggaaacctgactctg
gtgttggccatcatcgtcttcatcttcgccgtggtgggcatgcagttgtttgggaagagc
tataaggactgtgtgtgtaagatcgctagtgattgcgagctgccccgctggcacatgaat
gacttctttcactcatttttaatcgtcttccgggtcttatgtggagagtggatcgagacc
atgtgggactgtatggaggtggctggacaggcaatgtgtctcatcgtctttatgatggtc
atggtcataggaaacttggtggtcttgaatctgttccttgccttgctgctgagctccttc
agcgcagacaacttggcagcttccgatgatgacggcgagatgaacaacctgcagattgca
gttattcgcatcaagaagggaattgcctgggtgaaggtcaaagttcgagaactggtcaac
atcatcctcaggagaaaggtcactgatgaggccaagccgctagacgacatgtacgaccgg
aagctaaactgcatcaccaatcacactggtgtggacattagccgtgacctggactatcag
aaaaatggcaacggaaccaccagtggtataggcagtagcgtgggcaagtacatgattgat
gatgaccacatgtccttcatccacaaccccaacctgaccgtatgtgtgcccattgctgtg
ggcgagtcagactttgagaatcttaacacagaagatttcagcagcgagtctgaagcagag
ggcagcaaagaattggatgacatcagctcttcagagggaagcaccatagatattaaacca
gaggtagaggaagcggtggtggtggaggcagtagaggagtatgttgacccagaaccttgt
tggactgaaggttgtgtggcccgctacaagtgttgtgacgtgcccatcaccgagggctgg
ggtaagagttggtggttcctccggaagacctgctatctcattgtggagcacaactggttt
gaaactctgatcatctttatgatcctcctcagtagtggagcattggcttttgaggatgtg
tacattgaacagaggaagacaatccgtattattctggagtacgctgacaaggtctttacc
tacatcttcatattggagatgttgttaaagtgggtggcctacggttttgtcaagtatttc
accaacgcctggtgctggctggatttcttcattgttgacgtgtctatagtcagccttata
gctaatgcgctgggctactccgaactagggcccattaaatcactcaggacactaagggcc
ctgagacccctcagagcattgtcacgttttgaagggatgagggtggtagtcaacgccttg
gtgggtgccatcccttccattatgaatgtcttgctggtttgcctcatcttttggctgatt
ttcagtatcatgggtgtcaacctgtttgcgggaaagtactactactgctacaatgcaact
gaaaaggcaatgttcgaaattgatgtagtcaacaacagatcagagtgccaagcattgata
aatgataactacacagaggtgcgctggagaaacgtcaaaatcaactttgacaatgtgggt
gctggttacttggctctactgcaagtggcaacgtttaaagggtggatggatatcatgtat
gcagcaattgattcacgaaaggtggaagaccaaccaaagtatgaggacaacatctacatg
tacatctactttgttatcttcattatatttggctctttcttcacactcaacctcttcatt
ggtgtcatcattgataacttcaaccagcagaagaaaaagtttggagggcaggatatcttt
atgacagaggaacaaaagaagtactacaatgctatgaagaagcttggctcaaagaaacct
cagaaacccatacccagaccccagaacaagctccagggcatggtgtttgactttgtgaca
cagcaggtctttgatatctcaatcatgatcctcatctgtttgaatatggtcaccatgatg
gttgagacagatgatcagtcacaggagactgaaaacattctgtactgggttaacttcatt
ttcatcgtggccttcacttctgagttcgtcctgaagctctttgcactgcgtcattactac
tttaccaatggctggaacatctttgactgtgttgtggtcattctctctatcgtgggtatg
ttcctggctgacctgatcgagaagtactttgtgtcaccaacgttgttcagggttatccgt
ctggctcgaatcggacgtatcttgcgtctgatcaaaggagcaaagggcattcggacttta
ctgtttgccctgatgatgtcactgccggccctgttcaatatcggccttctgctgttcttg
gtcatgttcatcttttctatctttggcatgtcaaactttgcctacgtaaagcgggaatct
ggtatagatgacttgtataattttgaaacatttgggaatagcatgatctgcctgttcatg
ataaccacctcagcagggtgggatggccttcttgctcctattctcaactacccaccggat
tgtgacccgaataaggagaatccaggtaccacagtgaaaggtgactgcggaaacccttca
gtgggcatcttcttcttcgtcatgtacatcatagtctcgttccttattgtggtgaacatg
tacatcgccatcatcctggagaactttagcgtcgccacagaggaaagcgctgatccactt
tgcgaggatgactttgagtccttctatgaaatctgggaaaagtttgaccccactgcctcc
cagttcatcaccttcgctaagctgggtgactttgctgacactctggagcacccgctgcgc
gttcccaagcccaacactatagagctgattgctatggacctgcctatggtgagtggcgat
cgtattcactgcctagatatcctgtttgccttcaccaaacgcgtgttgggtgacagcggt
gacctggacatgatgcggcaacagatggaggaacgattcattgctgccaatccttccaaa
gtgtcttttgagcccatcaccaccactctgcgccgaaagcaagagcacatgtctgcctcg
gtcattcagcgtgcttaccgtgcttatcttattcggagaggcttcatctgcaagcgcttg
ctcagcagcagcaggctggagaatggcgggaccaatcaggacaagaaagagggcacgcct
tctactgcctcgctgccgtcctacgacagtgtgaccaaacctgagaaggagaacctggat
gagagcgacagcaagggcaaaaaaggcaaaaaccaaaaagaggtcaaggaatccaagtgt
tag
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integrated database retrieval system
