Puntigrus tetrazona (Sumatra barb): 122329433
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Entry
122329433 CDS
T08985
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122329433 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122329433 (tmtopsb)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122329433 (tmtopsb)
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Vision
Opsin
122329433 (tmtopsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
MP_p6
Motif
Other DBs
NCBI-GeneID:
122329433
NCBI-ProteinID:
XP_043081583
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All DBs
Position
24:20037590..20065979
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AA seq
400 aa
AA seq
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MIESNVSLSCAWCAGGGDGTRAHLDENHSEHSLSPTGHLVVSVCLGFIGTFGFLNNTLVL
ILFFRYKVLRSPMNCLLVSISVSDLLVCVLGTPFSFAASTQGRWLIGRAGCVWYGFINSF
LGVVSLISLAVLSYERYCTMMGATQADSTNYRKVAMGIAFSWIYSMVWTVPPLFGWSCYG
PEGPGTTCSVNWAARTANNMSYIVCLFIFCLILPFVVIVYSYGRLLQAITQMSRINTAVS
RKREQRVLFMVVTMVLCYLLCWLPYGVMALLATFGRPGLVTAAASIIPSLLAKSSTVINP
IIYIFMNKQFCRCFHALIMCTTPERGSSFKNSSKVTKTLRTVRRANGQNVTFAVASAGHP
VIFAPNSGGQKSSSEAERPSPAVGQDTNRPVVSLVAYYNG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtccaacgtaagtctgagttgcgcgtggtgcgctggaggaggtgacgggacg
agagcgcacttggatgagaatcactcagaacacagtctgagtccgactggacacttggtg
gtctcggtgtgccttggattcatcggaacttttgggtttctcaacaacacgctcgttctc
atcctgttctttcgctacaaagtgctgcgctcgcccatgaactgtcttctggtgagcatc
tcggtgagcgatctgctggtgtgcgtcctcggcacgccgttcagcttcgccgccagtacg
cagggccggtggctcatcggacgcgcgggatgcgtgtggtacggcttcatcaattcgttc
ctgggcgtcgtgtctctaatctccctggcggtgctgtcttacgagcgctattgcaccatg
atgggggccacgcaggccgactctaccaattatagaaaggtggccatgggtattgccttc
tcctggatatattccatggtttggactgttccaccgctgtttggatggagctgttatggt
ccagagggtcccggcaccacctgcagcgtcaactgggccgccaggactgccaacaacatg
tcttacatcgtctgtctgtttatcttctgccttattctcccgtttgtggtaattgtctac
agctatggcagactccttcaggctatcacgcagatgagcaggatcaatacggcggtgagt
cgaaagcgtgagcagcgtgttctctttatggtggtcaccatggtgttgtgttacctgctc
tgctggctgccctacggggttatggccctgctggccacgttcggtcgtcccggcctggtc
acagccgctgccagcattattccttctctattagccaagagcagcaccgtcataaacccc
atcatctacatcttcatgaacaaacagttttgcagatgtttccatgcactcatcatgtgc
accaccccagaaagaggctccagcttcaaaaactcctccaaagtcaccaaaactctcagg
acagtgcgacgcgccaatggccagaatgtgacctttgcagtggcctcagctggccatcct
gttatctttgctcctaacagcggtgggcagaaaagttcctcagaggctgagagaccatct
cctgctgtgggccaagacaccaacagacctgttgtctctcttgtggcctattacaatggt
tga
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