Puntigrus tetrazona (Sumatra barb): 122329490 Help Entry 122329490         CDS       T08985                                  Symbol col11a1a Name (RefSeq) collagen, type XI, alpha 1a   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ptet  Puntigrus tetrazona (Sumatra barb) Pathway ptet04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ptet00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     122329490 (col11a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptet00536]     122329490 (col11a1a) Glycosaminoglycan binding proteins [BR:ptet00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122329490 (col11a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Laminin_G_3 Motif Other DBs NCBI-GeneID:  122329490 NCBI-ProteinID:  XP_043081679 LinkDB All DBs Position 24:complement(21109238..21170910) Genome browser AA seq 1820 aa AA seqDB search MERPRWSPMWKTKRWLLDSTVFKFITVSLVLVLQAPNVRAAEPVDVLKVLEFPTVPEGVQ KTSGFCTNRRASQPDTAYKIGKNAQISAPTKQLFPDGVFPEDFSILTTIKPKAGIQSFLL SIYNEKGVQQLGVEVGRSPVFLYEDQTGKPAPEDYPLFRSLNLADGKWHRVGISVEKKTV TIIVDCKKKLTKPLGRSDQAGIDTNGITVFGTRILDEEAFEGDIQQLLIVADPKAAYDYC EHYSPDCDVPHKDTLQAQEPGEEYTTAVEYGDLYDYYEGANPTATDEYSEPQPNNVDGEY YTDSELDYGTVDASKTQSPVATTGPNQAMEEEVFSDYVTETAQAGLDPTAAPEAVLPSGT ADPVGVDAYDFKEYDLKEYDVTGLDKKQYEYGAYDEFGNVAPNPTSNYEDSFGPGVAAET DIAETEVTSDLGVGAGLGQKGEKGEPAVIEPGMLIEGPAGPHGPAGLPGPPGLQGPPGSA GDPGDRGPPGRAGLPGADGLPGPPGTMLMLPFRFGGDGEKGPVVSAQEAQAQAILSQARL AMRGPPGPMGLTGRSGPVGLPGATGLKGESGDHGPQGPRGIQGPPGQMGKPGKRGRAGAD GARGMPGEPGSKGDRGFDGLPGLPGEKGHRGENGPSGPPGPSGEDGPRGEDGEIGPRGLA GESGPRGLLGPRGPPGPPGQPGIAGVDGPQGPKGNMGPQGEPGPPGQQGIPGTQGLPGPQ GPIGPPGEKGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGALGQPGPQGPIGYPGPRGVK GADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGES GPPGPAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKAGPRGQRGPT GPRGARGARGPTGKPGPKGTAGNDGPPGPPGERGPQGPQGPVGFSGPKGPPGPPGKDGLP GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAGGKE GAKGDPGPPGSPGKDGPPGLRGFPGERGLPGVTGPPGLKGAEGPQGPPGPVGSPGERGAA GPAGPIGLSGRTGPQGPPGPAGEKGAPGERGPPGPAGRDGVQGPVGLPGPAGPQGPPGED GDKGEVGEPGQKGSKGDKGEHGPPGPPGLQGTIGAPGPAGGDGEPGPRGQQGMFGQKGDE GSRGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPSGADGPQGPPGGI GGMGSVGEKGEQGEAGNPGPPGEPGPGGPKGERGEKGEAGPSGAAGPAGPKGPPGDDGPK GNPGPVGFPGDPGPPGEPGVAGIDGGPGEKGEDGESGQPGPPGPSGEAGPPGPPGKRGPP RAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPPGKPGPEGLRGIPGPVGEQGLPGAP GQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGPAGSK GDSGISGAPGPIGPPGPPGLPGSQGPKGSKGSSGPAGQKGDTGSSGPPGPPGPPGEIIQP LPMQTPKKSRRSIDMQADEAGTMLDYGEGMEDIFSSLNNLKQDIERMKYPMGTQNNPARS CKDLQLAHPEFPDGEYYIDPNQGCSGDSFKVYCNFTAGGETCIFPDKKSNGVRISSWPKE APGSWFSEFKRGKILSYVDAEGNSINMVQMTFLKLLTASARQNLTYNCHQSVAWHDATTD SYDRALRFLGSNDEEMSYDNNPFIKALSDGCAVRKGYGKTVLEINTPKIDQVPIIDVMFT DFGDPNQKFGFEVGPVCFLG NT seq 5463 nt NT seq  +upstreamnt  +downstreamnt atggagaggccaaggtggtccccaatgtggaaaacgaaaaggtggcttttggattccact gttttcaaattcatcacagtttccctcgtcctggttctgcaggctccaaatgtcagagca gcagaacctgtggatgtcctaaaagtattagaattccccactgtcccagaaggagtacag aaaacttcaggattttgcacaaaccgaagagcatcacagccggacacggcctacaaaatt ggcaagaatgcccagatcagtgccccaaccaagcagcttttcccagatggtgtgttccct gaagacttttccatcctaaccaccatcaagcccaaagctggaatccagtcctttcttttg tccatctacaacgagaaaggcgtccagcaactaggcgtggaggtgggccgctcacctgtc ttcctgtacgaggatcagacaggcaagcctgccccggaggattaccccctgttccgctcc ctcaacctggccgacggaaagtggcatcgtgtaggcattagcgttgagaagaagactgtg accatcattgtcgactgcaagaagaagctgacaaagcccttgggcaggagtgaccaagct ggtattgacaccaatggtataaccgtttttggaaccaggatcctggatgaggaagcgttt gagggtgatatccaacaactgctgattgtggccgaccctaaagcagcttacgactactgt gaacactacagcccagactgtgatgtcccacataaggacacactacaagcacaggagccc ggagaggagtacacaactgctgttgaatacggtgatttatatgattattatgagggagcg aaccccacagcgacagacgaatattctgagccgcagcctaacaatgtagacggagagtac tatacagacagtgaacttgactacggaacagtagatgcttcaaaaactcagtctcctgtc gcaaccactggaccaaaccaggctatggaagaggaagttttcagtgactatgtcactgag acagcccaggctggtctggatccgaccgctgccccagaagccgtgctgcccagcggcacc gccgaccccgtcggagtggacgcgtatgactttaaggagtatgatcttaaggaatatgat gtgactgggcttgacaaaaagcaatatgagtatggggcgtacgatgagtttggcaatgtg gctccaaaccctacgtccaattacgaggacagtttcggtccaggggttgccgccgaaacc gacattgctgaaacagaagtgacgtcggacttgggtgttggtgctggtctgggtcagaaa ggagaaaaaggagaacctgcagtgattgagccgggaatgctgattgaaggacctgctgga ccacatggacctgctggtcttccaggccctcctggtttacaaggcccccctggttcagcc ggagatcctggtgacaggggtcctcctgggcgtgctggtcttcccggagcggatggcttg ccaggaccccctggtactatgctgatgctgccattccggtttgggggtgacggggaaaag ggtccagtggtgtcggctcaggaggcccaggctcaggccattctctctcaggccaggctc gctatgagaggtccgccaggtccaatgggtctcactggaagatctggcccggtgggtctt ccaggagctactgggctgaagggagagagtggagatcatggtcctcagggtcctaggggt atccaaggcccaccggggcaaatgggaaaacctggcaagagaggtcgtgctggagccgat ggggcccgtggaatgcccggagaacccggatctaagggtgacagaggttttgatgggctt ccgggtctgcccggtgagaagggacacaggggtgagaacggcccttctggtccccctgga ccttctggagaggacggaccaaggggagaagatggagagattggaccaagaggacttgct ggtgagagtgggccgcgaggtctgctcggcccaagaggccctcctggacctcctggacaa cctggcatcgctggtgttgatggtccacagggtcccaaaggaaacatgggaccccaggga gagccaggccctcctggtcaacagggaatcccaggaacacagggtcttccaggtccacag ggccccattggaccgcctggagaaaaaggtcctcagggaaggtctggtttgcctggattg cctggcgctgatggaccccctggacatcctggtaaagagggtccacctggagagaaagga gctttgggccagcccggtccccagggccccatcggctatcctggccctcgcggtgtgaag ggtgctgatggcgttcgtggactgaagggaggcaaaggagagaagggcgaggatggtttc ccaggtttcaagggagacatgggtctcaaaggcgacaggggtgagcttggattggctgga cccagaggtgaggatggaccagagggcccgaagggtcgtgcaggtcctaacggtgaatct ggacccccgggacctgctggagaaaagggcaaacttggtgttccgggattgcccggctat ccaggacgtcaagggccaaagggttcgaccggtttccccggattcccaggagccaacgga gagaaaggagccaggggagttgcagggaaagcaggtccaagaggtcaaagaggtccaacg ggtccccgtggtgcgcgtggtgccagaggcccaacaggaaagccaggccctaagggcaca gcgggcaacgatggtccacctggcccacctggcgagagaggacctcaagggccccagggt ccagttggtttctcaggaccaaagggcccccctggaccacctggaaaggatgggctgccc ggtcaccctggtcagcggggagagactggttttcaaggcaaaactggcccaccaggacct ggaggtgttgttggaccacagggtccaacaggagaaaccggccctattggtgagagagga catcctggaccccctggtccccccggagagcaaggtcttccaggtgctggtggaaaagaa ggtgcaaagggagatccaggtcctccgggcagtccaggaaaagatggtcctccaggactg agagggttcccaggagagagaggtcttcctggagtgacaggtccacctggtttgaaagga gccgagggccctcaaggcccccctggtcctgttggttcccctggtgagagaggagcagca ggacctgctggccccattggcctgtccggacgaactggacctcagggacccccgggacct gctggagagaagggcgcaccgggagagagaggtcctccaggtccagccggtcgggatgga gtacaaggtccagttggtctaccaggtccagcaggacctcagggtccacctggagaagat ggtgacaagggagaagtgggagaaccaggccagaagggaagcaaaggcgacaaaggcgaa cacggtcctccaggaccacctggtcttcagggaactattggagctccaggacctgctgga ggtgatggtgaaccaggtcctcgtggacagcagggtatgtttggacagaagggagatgaa ggatcccgaggcttccctggacctcctggtcccatcggtctgcagggtcttcctggacca cctggtgagaaaggggaaaatggagacgttggtcctatgggtccccctggcccacctggt cccagaggtcctcaaggtccttccggtgctgacggtccacaaggtcctcctggtggaata ggaggaatgggatctgtaggtgagaagggtgagcaaggagaagctggaaaccctggacct cctggcgagcctggacctgggggcccaaaaggtgagcgaggagagaaaggtgaagctggt ccctctggtgctgctggacctgcaggtcccaaaggaccccctggagatgatggacccaag ggtaatcctggccctgttggttttcctggagacccaggtccacctggtgagccaggtgtt gctggaatagatggaggcccaggagaaaaaggagaggatggggaatctggtcaacctgga cctcctggtccttctggagaagctggcccaccgggacctcctggcaaaagaggaccccca agggctgctggagctgaaggcagacaaggagagaagggcgccaagggtgaggcaggagct gagggtccaccaggtaaaactgggccagttggccctcagggtcctcctggaaagcctggt cctgaaggtctacgaggaatccctggacctgtgggtgaacaaggacttcctggtgctccc ggacaagacggcccacctggaccaatgggacctcctggtctcccaggcctgaaaggagac cccggctctaagggtgagaagggtcaccccggtcttatcggtctcatcggaccccccggt gagcagggagagaagggagatcggggtttgcctggtcctcagggccctgctggcagcaag ggtgattctggtatcagtggtgctcctggtccgatcggtccacctggtcctcctggattg cctggttcacaagggccgaagggatccaagggttcgtctggtcctgctggtcaaaaggga gacaccggctcatctggacctcctggtcctcctggtcctcctggtgagatcatccagcct ttgcctatgcagacgcccaagaagtcccgccgctccatcgacatgcaagcagacgaggcc ggcaccatgctggactacggagagggcatggaagacatcttcagctccttgaataacctc aaacaggacatcgagcgcatgaagtaccccatgggcacgcaaaacaaccccgcacgaagc tgcaaagacctacagctcgctcacccagaattcccagacggtgaatactacatcgatccc aaccagggatgctccggggactccttcaaagtgtactgcaacttcacagcgggaggcgag acctgcatcttccctgataaaaagtcaaatggagtgagaatatcttcatggcccaaagag gctcctggctcctggttcagtgaatttaagcgtggcaaaatactttcatacgtggacgca gaaggcaactcgataaacatggtccagatgaccttcctcaaactactgacagcctccgcc aggcaaaacctgacctacaactgccaccagtcagtggcctggcatgacgccactacggac agctacgacagggcactacgcttcctcggctccaacgacgaggagatgtcatatgacaac aaccccttcatcaaggccctgtcagatggctgtgcggtgaggaagggctacggaaagacg gtactggagattaacactcctaagatcgatcaggttccaatcatcgacgtgatgttcact gactttggggatcctaaccagaaatttggattcgaagttggtccagtctgcttccttggc taa

DBGET integrated database retrieval system