KEGG   Puntigrus tetrazona (Sumatra barb): 122329573
Entry
122329573         CDS       T08985                                 
Symbol
wdr48a
Name
(RefSeq) WD repeat-containing protein 48a isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122329573 (wdr48a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptet03400]
    122329573 (wdr48a)
DNA repair and recombination proteins [BR:ptet03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122329573 (wdr48a)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_Vps41 WD_LRWD1 WDR54 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 122329573
NCBI-ProteinID: XP_043081805
LinkDB
Position
24:complement(4920284..4935824)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSIN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKMEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEESELNHASVNGEHESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDSESQTGGSAAEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatacgtg
atcagggacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatccg
gctcttaaccggctcttcaccgctggacgagactctatcatcaggatatggagcattaac
cagcacaagcaggatccgtacattgcatcgatggagcatcacacagactgggtcaatgac
atcgtcctctgctgcaacggcaaaacattgatatcagcgtcgtcagacaccacggtgaag
gtctggaacgcacacaagggcttctgcatgtcaacgctgagaacacacaaggactatgtt
aaagcactggcatacgctaaagacaaagagctggtggcttctgcgggtctggacagacag
atctttctctgggacgtgaacacgctgaccgctctgaccgcctccaataacaccgtcacc
acgtcttctctcagcggaaacaaggactccatctacagtctggcgatgaaccagatgggg
acggttatagtgtcaggatccaccgaaaaggttctgagagtgtgggacccgcgaacctgt
gccaaactaatgaagctgaaaggacacacggacaacgtcaaatcactgctgctcaacaga
gacggaactcagtgtctttcagggagttcggacgggacgatccggctctggtctctgggc
cagcagaggtgcatcgccacgtaccgcgttcacgacgagggcgtctgggcgctgcaggtc
aacgaggccttcacacacgtctactccggaggacgcgaccggaagatatactgtacagac
cttcgcaatcctgacatccgtgtgctgatctgtgaggagaaggcgcccgtgctcaagatg
gagctggaccgctcggccgatccgcattcggccatctgggtctccaccaccaagtccacg
gttaataagtggtctctgaagggtatccataatttccgagcgtctggtgattatgataat
gactgcagcgctcctctgacgccgctgtgtactcagccggagcaggtgatcaaaggcggc
gccagtataattcagtgccacattctgaacgacaagcgtcacatcctgaccaaagacacc
aacaataacgtggcgtactgggacgtgctgaaggcctgcaaagtagaagacttgggcaag
atggagttcgatgaagagatcaagaaaaggttcaagatggtttacgtgccgaactggttt
tcagtggatctgaagacggggatgctgacgataacgctggacgagagcgactgcttcgcg
gcgtgggtctctgccaaagacgccggattcaccagccccgacggatccgaccccaaactg
aatctgggcgggctgctgcttcaggcgctgctggagtactggcctcggactcacatcaac
cccatggacgaagagagcgagctcaaccacgccagcgtgaacggtgagcacgagagccgg
atccagaaagggaacgggtatttccaggtgcctccgcacactccggtgatcttcggggaa
gcgggaggaaggacgttattcaggctgctgtgtcgagactccggaggagagacggagtcc
atgttactcaacgagacggtcccgcagtgggtcatcgacatcaccgtggacaaaaacatg
cccaaattcaacaaaatcccgttctacctccagccccattcgtcttccggagcaaaaaca
ctgaagaaggatcgtttgtcggccagtgacatgctgcaggtgaggaaggtgatggagcac
gtgtatgagaagatcataaacctggacagcgagtcacagacgggcggctcggccgcagag
aaacccagcgaacagaaggaggaggaagacatggcagtactagcagaggagaagatcgag
ctgctctgtcaggaccaggttctggatcccaacatggatctgcggacggtgaagcacttc
atctggaagagcggcggcgatctgacgctccactaccggcagaaatccacgtga

DBGET integrated database retrieval system