Puntigrus tetrazona (Sumatra barb): 122329671
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Entry
122329671 CDS
T08985
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122329671 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122329671 (lrrc4bb)
Cell adhesion molecules [BR:
ptet04515
]
Immunoglobulin superfamily
NGL family
122329671 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
122329671
NCBI-ProteinID:
XP_043082049
LinkDB
All DBs
Position
24:complement(3630950..3640918)
Genome browser
AA seq
724 aa
AA seq
DB search
MQAAIVTGFFSPSPLIWLVQLLLWPHLLGPRLAAASPACPAPCSCSNQASRVICTRKGLN
EVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVALRKL
WLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGNGYSYFTTVTVETVETGQDGHDSARQFVNETFISFPGPT
AASASAGPTGSMLSSLSPRATRAPDRPFTVSITDVANVTGIEGVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGSAGGASGITGGSTVHTGAGSIV
GSGQSPRNHDPEIMTLPSVGQVDHLNHYYKSHHFNNNVLGLNMASGMLNNKPNPSSQNQA
STMKMGTSGDPSNPGSTSPPLPIPIPMAMTFHGTLKGLSHVPNMQTEPLLLSNGSKESVQ
ETQI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctattgtaacaggctttttcagcccctcccccctcatctggttggtccaa
ctcttgttgtggccacacctccttggacctagattggccgcagccagtcccgcctgccct
gctccctgtagctgttccaatcaagccagtagagtgatctgtaccagaaaaggcttaaat
gaagttccacagagtatctcgtccaatactcgatacctcaacctccaggagaactccata
caggtgatcaggtcagacaccttcaagcacctaaatcacctggagatcttacagttgtct
aagaaccagattcgccagatagaagtgggagctttcaatggccttcccaatcttatcacc
ctggagctttttgacaacagactaccactggtaccatcacaggcgttcgagtacctgagc
aagctacgtgaactctggctaaggaacaaccccatagagacactcccggcatatgccttc
caccgcgtgccgtcgctgcgacggctagaccttggcgaactgcgcaaactcagtttcatc
tcggaggccgctttcgaagggttgctgaatctacgtttcctgaatcttggcatgtgcggg
cttaaggatgtacccaacttgacgcctctcgtgaggctagaggaactggagctgtctgga
aaccagctgggagtggtgcgtcctggatctttccaaggcctggtggctctacgcaaacta
tggctcatgcactctcggatctccgtcattgagaggaatgccttcgatgacctcaagaac
ctggaggagctcaatctgtctcacaactctctgcattcgctgccccacgatctcttcact
ccactgcagcagttagagcgtgtccatctgaaccacaacccttgggtttgcaactgcgac
gttctgtggctgagctggtggcttaaagaaaccgtgcctgataactccacttgttgtgcc
cgttgccatgccccacctggtactaaaggcaggtacattggtgatcttgaccagcgagac
ttcacgtgctacgcacctgtgattgtggagccacccactgacctgaacgtgacggaggga
atggcagcggagctgaaatgccgcactgggacatccatgacttctgttaactggttgacc
cccaatggaaccttgatgacgcatggagcgtacaaggttcggatctcggtcctgcatgat
ggaaccctgaatttcaccaacgtgaccatgcaagacaccggaccctacacctgtatggtc
accaactctgctggcaacaccacagcgactgctgtgttaaacgtctctgcatctgaccca
ggcaatggctacagctacttcacaactgttactgttgagaccgtagagactgggcaagat
ggccacgattcggcacggcagttcgtcaacgagacgtttatcagttttccaggcccgacg
gctgcatctgcatcggcaggtccaactggctcgatgctgtcctccttgtcgcctcgagcc
actcgtgcacccgatcgccctttcacggtctccatcacagacgtcgccaacgtgacgggc
attgaaggcgtaatgaagacgaccaagatcatcatcggctgctttgtggccatcaccttc
atggcggccgtgatgctggtcgtcttctacaagcttcgcaagcagcaccaactgcacaaa
caccacggcccggcacgtgccatagagatcatcaacgtcgaggatgagatcggatctgcc
ggtggagctagcggcatcacgggagggagcaccgtccacacaggagcaggttccattgta
ggaagcggacagagtccaaggaatcatgaccctgagatcatgactctgccgagcgttggg
caagtggaccaccttaaccactactataaatcgcatcactttaacaacaacgtgctaggc
ttgaacatggcctctggaatgcttaacaacaaacccaacccgtcctcccaaaaccaggct
tcgaccatgaaaatggggacttccggtgacccctccaaccctggctcaacctcacctcct
ctgccaattcccatcccaatggcgatgaccttccatggaactctgaaaggccttagtcac
gttcccaacatgcagactgagcccctgttgctatcgaatggctccaaggagagcgttcag
gagacccagatctga
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