KEGG   Puntigrus tetrazona (Sumatra barb): 122329723
Entry
122329723         CDS       T08985                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24 isoform X1
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122329723 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptet04131]
    122329723 (wdr24)
Membrane trafficking [BR:ptet04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122329723 (wdr24)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WDR55 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_RFWD3 MIOS_WD40 Beta-prop_Aladin Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_HPS5 zf-RING_16 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 BBS2_Mid
Other DBs
NCBI-GeneID: 122329723
NCBI-ProteinID: XP_043082123
LinkDB
Position
24:3367787..3382494
AA seq 779 aa
MEKMTRVSTISGSTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEDGFVERLNLR
VGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLARPCRNKQEQLFTEHKRTVNKV
CFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSIKDYFTFAASFENG
NVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLATGGRDKMVKVWDMSTNRVKEIY
CVQTIASVARVKWRPERRYHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVTTGIVWR
HQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLMTAPQSV
GDVGRKTYPGGDRRYPIFFFKKPDVTEQFAQVSSALSVFESEAGSSVGMDWFINTAQSYL
LSGKPFAELCEHNAQVAKRLNRPQESTTWTMLRIMFSEPANPSLSTNHNLNKSGNLPLVN
SFSMKEMSAALSERNKENRQDNLHSLETNLNNNDENEETEGSEGQAEYLFGDAELDDDDL
YSMEHDNQAAEEPEYLLPQEAFPLRHEIMDHPSAPEPVQEKPESPHVSGSEAESTCLTPM
ESFSLISVSQLLFSPHLPPKFFCPIVKEMLCYYAEQGDVQMAVSVLIVLGDRIRKEIDEL
TQEHWYMSYIDLLQRFELWNVSNEVIKLSTCGAIMCLNQASTTLHINCSNCKRPMSNKGW
ICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHVMEWLKQSKHCPAGCGHLCEYT
NT seq 2340 nt   +upstreamnt  +downstreamnt
atggagaagatgaccagggtcagcaccatcagcggctctaccatgttttgtcacctggat
gcacctgccaacgccatcagcgtgtgtcgggatgctacacaggtggtggttgccgggcga
aatattttcaagatttacggcctggaggaggacggtttcgtggagcgtctgaatctgcgc
gtgggacgcaagccctcgctgaacttcagctgcgcagacgtcatgtggcatcagatggag
gagaacctgctggccaccgccgccactaacggagccgtggtgacgtggaacctggctcgg
ccctgccgtaacaaacaggaacagctgttcaccgaacacaagcgcacggtcaataaagtc
tgcttccaccccactgaggtcaacatgctgctgtccggctctcaggacggattcatgaag
tgcttcgacctgcgcaagaaggagagcgtcagcaccttttctggtcagtctgagagcgtg
agagatgtgcagttcagtattaaggattatttcacgttcgccgcctcgttcgaaaatgga
aacgtgcagctgtgggacattcgcagacccgaccgatacgagagaatgttcaccgctcac
acgggacccgtcttctgctgtgactggcaccccgaggacaggggttggctcgccacgggc
ggacgtgacaagatggtcaaagtctgggacatgtcgaccaaccgcgtgaaggagatctac
tgcgttcagaccatagcgtcggtggccagggtgaagtggcgtccggagcgccggtatcac
ctggccacctgctccatgatggtggaccacaacatctacgtgtgggacgtccgccggccg
ttcatccccttcgccaccttcgaggagcacaaagacgtgaccacaggaatcgtgtggcgg
catcagcacgacccatacttcctgctgtcgggctccaaggacagcactctgtaccagcac
atgtttaaagacgccagcagacccgtcgaccgcgccaatcccgagggactctgttttggg
ctgtttggagacctggcgtttgctgctaaagagagtctgatgaccgctccccagtctgta
ggagatgtgggacgtaaaacctacccgggtggcgatcggcggtaccctatcttcttcttt
aagaagcccgatgtgacggagcagttcgcgcaggtttcgagcgcgctcagtgtgtttgag
agcgaagcgggcagcagcgtcgggatggactggttcattaacaccgcacagagttacctg
cttagcgggaagcccttcgccgaactctgtgagcacaacgctcaagtcgccaagagactc
aacagaccacaggaatcaaccacatggacaatgctgcgaatcatgttttcagagccagct
aatccgtccttgtcaaccaatcacaatctaaataaatcaggaaacctcccgctcgtcaac
agcttcagcatgaaggagatgagcgccgccctcagtgagaggaacaaagaaaacagacag
gacaacctccacagcctggagaccaacctcaacaacaatgacgagaacgaggagacggag
ggcagcgagggtcaggcggagtatctgtttggagacgccgagctggacgacgacgatctc
tacagcatggagcacgacaaccaggcagcagaggaaccggagtacctgctccctcaggag
gcgttcccgctacgccacgagatcatggaccacccctcggccccggagccggtgcaggag
aagcccgagtcgccccacgtcagcgggagcgaagccgagagcacgtgtctgactcccatg
gagtccttcagtctcatttccgtctcgcagctgctgttctcgcctcacctgccgcccaag
ttcttctgccccatcgtgaaggagatgctgtgctactacgccgagcagggcgacgtgcag
atggccgtgtccgtgctgatcgtactcggcgaccgcatccgcaaggagatcgacgagctc
acgcaggagcactggtacatgtcctacatcgacctgctgcagcgcttcgagctgtggaac
gtcagcaacgaggtgatcaaactgagcacgtgcggcgccatcatgtgtctgaatcaagcc
tccaccaccttacacatcaactgcagcaactgcaagagaccaatgagcaacaagggctgg
atctgtgacaggtgccatcagtgtgcgagtgtgtgtgccgtctgtcatcacgtggtcaaa
ggcttgtttgtgtggtgtcagggctgcagtcacggaggacatctggagcatgtgatggag
tggctgaaacagtccaaacactgcccggccggctgcggacacctgtgtgaatacacctga

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