Puntigrus tetrazona (Sumatra barb): 122329910
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Entry
122329910 CDS
T08985
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122329910 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122329910 (rangap1a)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122329910 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
BUD22
Nop14
PI3K_1B_p101
SDA1_dom
CobT
Tim54
Motif
Other DBs
NCBI-GeneID:
122329910
NCBI-ProteinID:
XP_043082514
LinkDB
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Position
3:2002679..2010431
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AA seq
581 aa
AA seq
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MASDDVANLAASLAKTQVDEGELSYKGQGLKLDNAQSVETMVKEIEEFDGLRALRLEGNT
VGLEAARTIAKALEKKSDLQCCHWSDMFTGRLRAEIPPALVSLGDALIMAGARLKVLDLS
DNAFGPDGVKGIEQLLRSAACHTLQELRLNNCGMGIGGGKILAAALTVCHKESSALGAPL
QLKVFIAGRNRLENDGATALAQAFQLIGSLEEVHMPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKRGAIAMAQALKHLRNVQVINFGDCLVRSEGASAIAETLREGLPILKELNL
SFGEITEEAALEVARSVKHKDQFEKLDLNGNSLGEEGCDNLREVMESMDMADKLGTLSDD
EGEPEEDEDEEEDDDDDDDEEEDVEEEEEEDEEEEEEEDEGEEEKSELNQFSTPPSAPRT
PDVSSFLSFPSPDKLLRLGAKRSFLIQQQVDVSDVSKTVEAFLKISSVFKEDDGEVKAAV
LESVDAVLSKAFLTPSFQGLTFMSSLLVMLGLLKSEDKLKPVKVVPGHLQCLEHAVKQGY
FPREHITVLKAFMARPNKSLEPCSSARDRLKTTLQKLTAES
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggacgacgtggcgaacctcgccgcctcattggccaaaactcaggtcgatgag
ggcgagctcagttataaaggacaaggccttaaactggacaacgcccagtccgtggagacg
atggtgaaggagatcgaggagttcgacggcctgcgcgcgctccggctggaggggaacacc
gtcggcttggaggcggcgcggaccatcgccaaagccctggagaagaagagcgacctgcag
tgctgccactggagtgacatgtttaccggccgcctgcgagcggagatccctccagctctg
gtttctctgggcgatgcgttgatcatggctggagctcggctgaaggtcctggatctgagc
gataacgctttcggccccgatggtgtgaaaggcatcgagcagctgctgaggagcgccgcc
tgccacacgctgcaggaactgcgtctgaacaactgcggaatgggcatcggaggagggaag
atcctggcggcggctctgacggtgtgtcacaaggagtcgagcgcgctcggggcccccttg
cagctgaaggtgttcatcgcaggcaggaacagactggagaacgacggagccacagcactg
gcgcaagcctttcagttgattggcagtctagaggaagtccacatgccccagaatggcatc
aatcacccaggagtcactgctttagccacagcgatgcagcacaacccacagctacgagtc
ctgaacctcaacgacaacactttcaccaagagaggagcgatcgccatggcacaggcattg
aaacacctgcgcaacgtgcaggtgataaattttggcgactgtcttgttcggtctgaagga
gccagtgctatagcagagaccctgagagaaggactgccgatactcaaggagctgaatctg
tctttcggggaaatcacggaggaagctgcgttggaagtggctcgatccgtaaagcataaa
gatcagtttgaaaaactcgacctgaatgggaacagtttgggtgaagaaggctgtgataat
ctgcgggaggtaatggagagcatggacatggcagacaaactgggcactctgagcgatgac
gagggagagcctgaggaagacgaagatgaggaggaagacgatgacgacgacgacgatgaa
gaagaagatgtggaggaagaagaggaggaggacgaagaagaagaggaggaggaggatgag
ggcgaggaagagaagagtgaattaaaccagttctcgacgcctccttcagcgcctcggact
ccagacgtctcgtctttcctcagctttccgtctccagacaaactcctgcgactcggcgca
aagagaagcttcctcatccagcagcaggtggacgtgtcggacgtcagtaagaccgtggag
gcgttcctgaagatctcgtcggtgtttaaggaagacgacggcgaggtgaaggcagccgtg
ctggagagcgtcgacgcagtgctgagcaaggccttcctcacaccctccttccagggcttg
acctttatgtcgtcgttgctggtgatgctcggactgttaaagagtgaagacaagctgaag
ccggtgaaggtggtcccaggacatctacagtgtctggagcatgccgtgaaacagggctac
ttccctcgagaacacatcaccgtgctgaaggctttcatggccaggccgaataagtctctg
gagccgtgcagcagcgctcgagaccgtctgaaaaccaccctccagaaactcacagccgag
agctga
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