Puntigrus tetrazona (Sumatra barb): 122330104
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Entry
122330104 CDS
T08985
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122330104 (trpc1)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122330104 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
122330104
NCBI-ProteinID:
XP_043082860
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Position
24:10209036..10222878
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AA seq
800 aa
AA seq
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MHISALPYSLSVIMAALYQGTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLSSPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILSVLSVALMWP
LLSICYLLGPRSRVGQVIHTPFIKFIIHSASYFTFLLLLNLYSLVYNGDKKNTMGPPLQL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSMFKN
VKEEPSVYRKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEF
GKFLGLFLLVLISFTIGLTQLYGKDKDLSSSKNTTNDCEGIYCREQSIDTFHTFMGTCYA
LFWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIA
NHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKR
QNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRN
EMRDLLGFRTSKYAMFYPRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatctggcgttaaaggacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgaagaagcttctggaggagaaacgacacggtgaactaaacattaactgcgtggacgtg
ctcgggagagatgctgtcaccatttcaattgaaaatgagaatctagacatattgcagttg
ctcttggatcatggctgccaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctcctaaaccatcggcccaggcgttcctccaagccttctatt
gcgaaattgatgcaacgcattcaaaacccagagtattccaccaccatggatgtcgctcca
gtcattcttgctgcccaccggaacaattacgagattttgaccatgctattaaagcaagac
atctctctgcctcgaccccatgctgtaggatgcgagtgcactctctgtaatgccaagaac
aagaaggacagtcttcgtcactcaaggttccgtcttgatatttatcggtgcctttccagc
ccgtccttgattatgcttacagaagaagaccccattctaagagcattcgagctcagcgct
gatctgaaagagctgagcctggtggaagtggagtttcggaacgattatgaagaacttgcc
aagcaatgcaagatgtttgccaaggacctgctggctcaggcccgcaactcgcgtgagctg
gaggtcatactgaaccacacgtctagtgaggaccacgtggacaagagaggcctcctagag
gaacgcatgaacctcagtcgcctcaaactggccataaaatacaaccaaaaggagttcgtg
gcccagtccaactgtcagcagttcctgaacacggtgtggtttggggagatggcgagctac
cgccgcaaacacacatgcttgaagatcctgtctgttttgagcgtggcgctgatgtggcct
ctgctgtccatctgttacctgctgggaccccgttctcgagtgggccaggtcatccacaca
ccttttatcaagttcatcatacacagtgcctcctacttcaccttcctgctcctcctaaac
ctctactcactggtctacaacggggataagaagaacaccatgggtccccctttgcagttg
atagattaccttctcatcctctggatcataggcatggtgtggtctgatgtgaagcgtctg
tggtatgaagggttggaggacttcctggaagagtcacggaaccagctgagttttgtcatg
aactcgctttatttggccacttttgccctaaaagtggtggctcacagcatgttcaagaac
gttaaggaagagccgtcagtatacagaaaaaactgggatgcattccaccccctcttggtt
gccgaaggcctttttgcgttcgccaatgttctgagctatctccgtctgttcttcatgtac
accaccagctccatcttggggcctttacagatctccatgggccagatgctacaagagttc
gggaagtttcttggcttattcctgcttgtactcatctctttcaccattggcctgacacaa
ctatatggaaaagacaaggacctatctagctccaaaaatacaaccaacgactgtgagggc
atctactgtcgagagcagagcatcgacacctttcacacgttcatggggacatgttacgcc
ctcttctggtacattttttccctggcgcatgtggctctgtttgttacaaggatcagctac
acggaggagctgcggtcatttgttggtgctcttatcgtcggtacctacaacattgttgta
gtcattgttctcacaaaactcctggtggccatgctgcataagagcttcagacagattgcc
aatcacgaagataaggagtggaagtttgcccgggccaagctgtggctcagctacttcgat
gacaagtgcacattgcctccaccttttaacatcctcccttctcccaagaccgtgtgttac
ctggtcatcagtctgagcaaatggatctgttcccacacttcaactggaaaggtcaagaga
cagaatagcctcaaggaatggaggaacctcaaacagaaaagagatgagaactatcagaag
attatgtgctgtctcgttcaccgttacctgacctccacaaggcagaagatgcagagcacg
gaccaagccacagtagagaacctcaatgatctgcgccaagacctctccaagttccgcaat
gaaatgagggaccttttgggtttccgcacctccaaatacgccatgttttacccccgaagc
taa
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