Puntigrus tetrazona (Sumatra barb): 122330111
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Entry
122330111 CDS
T08985
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122330111
04082 Neuroactive ligand signaling
122330111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122330111
Ion channels [BR:
ptet04040
]
Ligand-gated channels
GABA-A
122330111
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122330111
NCBI-ProteinID:
XP_043082866
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All DBs
Position
24:19685257..19693900
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AA seq
470 aa
AA seq
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MKLVLLNLRLLCLACLWPVTLLNNPYPNRKKNKDVYLAEHGKNRFRGRIDYKLKRKDSTK
SLLIKTEQLLRIEDHDFAMRPGFGGSAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWK
DERLAFPSSNNLSRTFDGRLVKKIWKPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYS
VRITVTSLCSMDFSRFPLDTQNCSLELESYAYAENDLMLYWKNGNDSLRTDEIALSQFFI
EEFHPSHGLALYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAV
PARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNYFTT
KEEMKKLEQLKLSGYDASQAMAFDGCFHDQDIELSTFPLSDLNTEPCMSSRNSTTPELPP
VLGTRLRRRRSIRQSVNHIMNNSYKIDSYSRIFFPLAYFLFNIIYWSIYS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtcctgctgaatctcaggctgctgtgccttgcttgtctctggcccgtcacc
ttgctcaacaacccttatcctaaccggaagaaaaacaaggatgtttacttggctgagcat
ggcaaaaacagattcagaggacggattgattataaattaaagagaaaggacagcactaag
tccctcctgatcaaaactgagcagctgctgagaattgaagaccacgactttgctatgagg
cctggattcggaggatctgccatccctgtgggcattgatgttcaggtggagagtatagac
agcatctctgaagttaacatggacttcacaatgaccctgtacctgaggcattattggaag
gatgaacgtttggcttttccctccagtaacaatctgagccgcacgttcgatggccggctc
gtaaagaagatctggaagcctgatgtcttttttgtccattccaagcgctctttcatccat
gatactaccatggagaacataatgctgagagtatacccagacggcaacatcctttatagc
gtcaggattacagttacttctctgtgctcaatggacttcagtagattcccgttggacacc
caaaactgttccctggaattggagagctatgcatatgctgagaacgacctcatgttgtac
tggaaaaatggcaatgactctttgaggacagatgagattgctctctctcagttcttcatt
gaagagtttcacccctcacatggtctggcattgtacagcagcacaggctggtacaacagg
ctctacatcaacttcatcctcagaagacacatattcttctttatgctgcaaacatatttt
cctacaatgctgatggttgttctgtcctgggtgtctttttggatcgacaggagggcagta
ccggcccgtgtctcacttggcatcactacggtgttgactatgtccaccataattacggga
gtgtcagcgtccatgcctcaggtatcatacgtgaaagcggtggacatctatttgtggacc
agcttcctgtttgtgtttctgtccgtcatcgagtatgcagccgtcaactacttcactact
aaggaagaaatgaagaaactcgagcaattgaagctctcaggatacgatgcatctcaagcc
atggcattcgatggctgtttccatgaccaggacatagagctcagcacatttccattgtct
gacctaaacacagagccatgtatgtcctccaggaactccacaacacccgagcttcctccg
gtcctgggcacacgcctccgtcggcgtcgttctattcgccaaagcgtcaaccatatcatg
aataacagttacaagatcgactcctattccagaatattctttcctttggcgtactttctc
ttcaatatcatctactggagcatctactcctaa
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