Puntigrus tetrazona (Sumatra barb): 122330114
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Entry
122330114 CDS
T08985
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122330114 (rreb1a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122330114 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-met
zf-C2H2_6
zf-H2C2_5
zf-C2H2_jaz
zf-Di19
zf-C2H2_8
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
122330114
NCBI-ProteinID:
XP_043082870
LinkDB
All DBs
Position
24:complement(7868824..7914978)
Genome browser
AA seq
1708 aa
AA seq
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MSRRKQPNPNKVKLMENSTEETRTESAKCTLSREEAEQSDERQSPAPTGTQTKHTESSTS
VEEEASEWENGQNRLDEEMEVADGVDLSSINSMMSTVMKAAQLNGSVDSVHSTPSKVSVK
SPSTNRSGRKTQEAKDDSGCITCPLCDKSFQTQHQLTMHIRQHNTDSGTSDHSCSICGKS
LSSASSLDRHMLVHSGERPYECSVCHQTFTTNGNMHRHMKIHEKDSASSIPSSPTLSPPK
RRRHSAAKRKLSHDEDIEKSEETTSKKVKEDNIVDEQSLNKGQEEVLTCPICFKTLTCRN
DFDAHMETHPDTTLRCDLCCISFRTHRSLLRHNAATHKQLPTDPNGRPFIQNNPSIPLGF
NDLAFIDFSCQKFPQIAQIWCETNLRRCTGKFHRFVCDTCDKAFPLSSALDLHKASHETS
SGTQETTSHLTMKDELPTPEKSSFMDSLGLQHISQVKPAPSEEDVQQAKLDSIRVIHVEQ
NQSSVPQEAGIVGGVNLSLVDPTTLHGLSHQDALKLLSLQPFQTGFLVQPDGGMVVKPVC
GESNVELADIQQIIKVASAAPNQITLPPLSKAPCSAMQSGYKQMPPLKPKPLVAPRTSMV
ASTPPPLLNTQQASLGCISPSLPPPASHPLKTVRDLSPSSSSSSANNHAPAERIQMEAEC
MGDAHTPMDMDERHIKQENGKLEETTGKKGTSQKGSYPCRFCDQVFAFSGVLQAHMRYHL
GILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRLCHYPFTVKANCERHLRKKHMKNN
RKEIEKNIKYVTSSTSTADVLEQAGTNETTCRFCGEDLKTFRALQIHLRTHNGCQRKPFE
CKRCGAAFLAKRNCIHHLLKQHPEVQEQDIEEHIITLLAASTQNSPNPSPLNGVSPSTVV
QPIKVEDLSFYSVDMDQPLDFSNKSHGGSSAGSASGSPGIKIEPVSYDSSMEPIDLSIPK
NPVKKFKQDIEATLPREVKKEQSSISILAQALQAEKSIDEKSQPLGCYQVPVALSSLTGS
TNAAGRHLRLKPLLPKPSSAAVKELPPLASIAQIISSVSGAPDLLKRDNTNSLQADSDTH
GKQESPDILTEELSLESSKKRTRKRPSNSTAKEKPVMNATDPSIDLESSGEFASVERMLA
TTDANKFSAYLQTNTIELARKGGQQPGASDEKEVKDEKHLPAQQTVQAQQSKGKKNAYSN
SVQKMTCPFCPRVFPWASSLQRHMLTHTGQKPYPCPQCDAFFSTKSNCERHLLRKHGISN
RVLRRNGAIPKTKEAEEGSPESAESTSETELLMSEAMDLTRSDSEKPEASDAEKTSPAKP
TEAAVVEPLPHKEEEDPTALETLKHNDPEKEDGDSHSNKTLDLTFVSKQKDFKITEKDQP
QSSPAADSDVSDKATPQEESKFTCKICKKIFRYAATLTRHEKVHQLDVASDSTNGPEQSL
TKSDDPIVPCENKKEVAEEEVESVRKSTAENEGMGSVGESGSEEDKEERSDEEGAAAEPK
SAEGETEEPGSKPDKRKKVCSICNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHS
LVRHQRIHQKLRGADSDGSSCGVTGGPDEDCFSGRSASESECTPTSTNPPSENESELTDT
VKGEPTSQEKEEDCLPCAEEFKLTSKTGPASATETPKEPPAEKQASDSPTASDIEPSEGF
IQGLLEIHTKPTTEQILPTPEPPLLGVE
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgaaagcaacccaaccccaacaaagtcaaacttatggaaaattcaacagag
gagacaagaacggaatctgcaaagtgcaccctatctagggaggaggcggagcaaagcgat
gagcgccagagccccgcccccacaggaacacaaacaaaacacacagagagttctaccagt
gtagaggaggaagcaagtgaatgggagaacggacagaatagattagacgaagagatggag
gtagccgatggggtggacctgtcttccattaactccatgatgagcactgtgatgaaagca
gctcagcttaacggcagcgtagactccgtccactccacgcccagtaaggtgtccgtcaaa
agccccagcaccaaccgcagtggaagaaagacccaggaagccaaagatgacagcgggtgt
atcacctgtccactgtgtgataagagctttcagacccaacaccagctcaccatgcacatc
cgccagcacaacaccgacagcgggacttcggaccactcttgcagtatctgcgggaagtct
ctgagctcggctagctctctggatcgtcacatgctagtgcacagcggagagagaccctac
gagtgctctgtgtgccatcagactttcaccaccaatggtaacatgcacagacacatgaag
atccatgagaaggactctgctagctccatccccagcagtccgactctgtctccacctaaa
cgaagacgtcactctgcagccaaacgcaaactaagccacgatgaagacattgagaagtcc
gaggagacaaccagcaaaaaggtcaaagaggataacattgtagatgagcagagtttgaat
aaaggacaggaagaagtcttgacctgtcctatctgcttcaagaccctcacctgcagaaac
gactttgatgcccacatggagacccatcctgacactacactgagatgtgatttatgctgc
atctcgttccgcacacaccgaagtttgctccgccacaatgcagctacccataagcagcta
cccacagaccccaacggacgaccctttattcagaacaacccatccatccctcttggtttt
aatgatctagctttcattgacttttcatgccagaagttcccgcaaattgcccagatttgg
tgtgaaaccaaccttcggcgttgtactggcaaattccatcgctttgtatgtgacacatgc
gataaggcattccctctcagctctgctctagacttgcataaagcctcgcatgagacttcc
agtggcacccaagagactacttcacacttaactatgaaagatgagcttcccactcctgag
aaaagtagcttcatggactctttgggcttgcagcacatctctcaggttaagcctgccccc
tcagaagaggatgtccagcaggccaagcttgatagtattcgggttatccacgtagagcaa
aatcagtcctctgtacctcaggaggcaggcattgttggaggggttaacctgtctcttgta
gacccaacgactcttcatggtctgtcccatcaagacgctctcaaactgctgtcccttcag
cccttccagactggttttctggtgcagccagatggtggtatggtagtgaaaccagtttgt
ggtgaatccaacgtggaactcgctgatatacagcaaataatcaaagtagcttctgctgct
cctaaccagatcactctgccacctttatccaaggcgccttgtagtgctatgcagtcgggc
tacaagcagatgcctccactcaagccaaaacccttggtggctcccagaaccagtatggta
gcttcaactcctccacccctattgaacacccagcaagcttccctgggctgtatcagtcct
agcctcccaccccctgccagtcatcctctcaaaacagttcgggacctctccccatcttcc
tcgtcctcttctgccaacaaccacgctccggcagagaggatacaaatggaggcagagtgc
atgggagatgcccataccccaatggacatggatgaaagacatatcaaacaggagaacggc
aaattagaagagaccactggaaaaaagggaacatctcaaaagggctcgtacccctgccga
ttttgtgaccaggtctttgcattttctggtgtactgcaggcacatatgcgataccatttg
ggcatcctaccccaccaatgcaatatctgcgactatgttgcccctgacaaggcaacgcta
atccgtcatttgaggacgcacagtggtgagcgtccctatgtctgccggctctgtcattac
ccgtttactgtcaaggctaactgtgagcgccaccttcgcaaaaagcacatgaaaaacaat
cgcaaggagattgagaaaaacattaagtatgttacctcgtccacgtccacagcagacgta
ctggagcaggctggaactaatgaaactacctgtcgcttctgtggggaggacctaaagacg
ttcagagccctgcagatacatttgcgcacacacaacggctgccagcgaaagccatttgag
tgcaagcgttgtggtgcagctttccttgctaagcgtaactgtatccatcaccttctgaaa
caacatccagaggtccaagagcaggatattgaagagcacataatcactcttctagctgca
tcaacccaaaatagcccaaatccatctcctctcaatggggtttctcctagcactgtagtg
cagcctatcaaagttgaagaccttagcttttacagtgtagatatggatcaacctctggac
ttctctaacaaaagccatgggggcagcagtgccggaagtgcgagtggatctcctgggatc
aaaattgaacccgtctcttatgactctagcatggaaccaattgacctctctattcctaag
aatcctgtgaagaagtttaaacaagacattgaggccacattgccaagagaggttaaaaaa
gaacagtcctccattagcatacttgcacaggctcttcaagccgagaagtccattgatgag
aagtctcaacctcttggatgctaccaggtccctgttgctttgtcctctcttactggtagc
actaatgctgcaggaaggcacttgcgtttaaagcccctgcttcctaaaccttcctctgct
gctgtgaaggagcttccaccactagcatccattgctcaaataatttcctcagtttctggt
gcccctgaccttcttaagcgggataacactaatagtcttcaggctgattctgacacacat
ggcaagcaagaatcaccagatattttgacagaagagctctcactagagagctcaaagaag
aggaccaggaaaaggccatccaacagcacagcgaaggagaaacctgtaatgaatgccaca
gacccaagtattgatttagagtctagtggggagtttgctagtgttgagaggatgttggca
accactgatgccaacaagttcagcgcctatcttcagaccaacacaattgagctggcaaga
aaaggcgggcagcagccaggtgctagtgacgagaaagaggtgaaagatgagaaacacttg
ccagcccagcagactgttcaagcccagcagtccaaaggaaagaagaatgcatactcaaat
tctgtgcaaaagatgacttgccccttttgtcccagagttttcccttgggccagctcactt
cagcgtcacatgttaacacacacaggtcaaaagccatatccttgtccccagtgtgatgcc
ttcttctcgaccaagtccaactgtgagcgacatcttttacgcaaacatggcatttccaac
agagtgcttcgacgcaacggtgcaatacccaagactaaggaagcagaggaaggctcacca
gagagtgcagagagcacatctgagactgagctgcttatgagcgaggcaatggatctcaca
agatcagactcagaaaagcctgaagcatcggatgctgagaaaacttcaccagctaagccg
acagaggcagccgtggtagagcctcttcctcacaaagaggaggaggacccaacagcccta
gagactttgaagcacaatgacccagaaaaagaggatggcgattcccatagcaataagacc
cttgacttgacctttgtttctaagcaaaaggatttcaagatcactgagaaagaccagcca
cagtcctcccctgcagcagatagtgacgtgtctgacaaagcaacacctcaggaggagtcc
aaattcacctgcaaaatttgcaagaagatcttccgctacgctgccactttaaccagacat
gagaaagttcatcagctggatgtagcatcagactccactaatggacctgaacaaagcctc
acgaaatcagatgatccaattgtgccttgtgaaaataagaaagaggttgcagaggaagag
gtggagagtgtaaggaagagcacagcagagaacgagggaatgggcagtgtgggggagagc
ggatctgaggaggataaagaggagaggagtgatgaagagggagctgcagctgaaccaaag
agtgctgagggagagaccgaagaacctggcagcaagccggacaagaggaaaaaggtgtgc
agtatatgcaataaacgtttctggagccttcaggacctcaccagacacatgcgttctcat
acaggagagaggccttacaagtgtcagacatgtgagcgaactttcaccctcaagcacagt
ttggtccgacatcagcgaatccaccagaaactccggggagcggatagtgacggttcatct
tgtggggtcacaggtggaccagacgaggactgctttagtgggcgctcagctagcgagagc
gagtgcacacccaccagcaccaatccaccctctgagaacgaaagtgaattaacagatact
gtgaagggggaacccacctcacaggagaaagaggaggattgtctaccctgtgcggaagag
tttaaactaacctccaagacaggacctgcatcagcaacagagacacccaaagaacctcca
gcagagaaacaagcgtcggattcacccaccgcatctgacatagagccgtcggagggattc
atccaaggcttactggagatccacaccaagcccactactgagcaaattttgcccaccccc
gagccgccgctgcttggcgtagagtga
DBGET
integrated database retrieval system
