Puntigrus tetrazona (Sumatra barb): 122330169
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Entry
122330169 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair-scaffolding protein-like
KO
K22806
DNA repair-scaffolding protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122330169
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122330169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4503
DUF4502
TF_Zn_Ribbon
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-GeneID:
122330169
NCBI-ProteinID:
XP_043082965
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All DBs
Position
24:310865..364291
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AA seq
718 aa
AA seq
DB search
MSVLLVPMGREPRGSWQTKQESQLVEVLSSSKPEASLVHSCMGRSLQASTCIINAGEKWG
CGSHGQSAVVLCCSLSNFHSLSNTEAAFHEEKANGQKTIKGNTWRVCMAENTTPGSTGPS
LVVGAGLMSDMKGGFAERLNRLHSRQKSAISFWRHQCNSNPHQLVRRSNLNLKTQLRLSE
RSGVLVLRILGVLEECGMQAAVCNRLPEEKSVWLFSARTRPPSYSLRLGNIVHIYPPWQN
LVVEGERYPIILNTHFSQKVCEETKPDNAGGPRAAVSVEKCRPPPLTRSLWRSGTSQVSA
ETSIPCKQVGELNRSVVRKSLLDAVEDCGASGSQSGPVEVVVQRVYCIPIAKSLHRDSLQ
HRALYKPPPESAPPQHIGRLCALVQDSYGMFAEVLLHRVSTESEIQQTSEQLEGRVCLLQ
DLRVVQRLTRDKCSPLFSMIDSLWPPPVDPKSPDDLLQSRRSSPTRGHMVPLSGRTESPL
YRAPVLQTLREILQLKCRGEREMLLFVTDPSLQREPDTDGNRRTVAMCLRPSCLIQSSVT
QVLDALHTQPVLMFRDAVKENAQIFCWEQTVIQLEPKVPSFSLPRPIILDHLGPETLPYS
LCTVTGVVVAVDESTAFSWPTCSRCESCRLETREQQRGFVCLACGAVMDEPTTKMQLEVF
LSCSSLSRCTSKSSCSKRPFGYGVENVLGSEIGPLCVLVHVVDGGPSAWMGLEECDLR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgctgctggtccctatgggccgtgagcctagaggaagctggcaaaccaaacag
gagagccaactggtggaagttctcagctcatccaaacctgaggcctccctggtgcattca
tgcatgggacgctccctgcaggcctccacgtgcattataaacgctggtgaaaaatggggc
tgtggaagtcatgggcagagtgctgtagtcctgtgctgctccctgagcaatttccacagc
ctctcaaacacagaagcagcatttcatgaagagaaggcaaatggccagaagacaataaaa
ggaaacacatggagggtatgcatggctgagaacacaacaccaggaagcactgggccgagt
ttagtggttggtgctggtctcatgtctgacatgaagggaggttttgctgaaaggctgaac
cgactccacagcagacaaaaatcagccatcagcttttggagacatcagtgcaactcgaat
ccacatcagctggtaagacgatccaatctgaatctgaagactcaattacgtctttctgag
aggtcaggggttttggtgctgaggattctgggagttctggaggaatgtggcatgcaggcg
gctgtatgcaacaggctgccggaagagaaaagtgtgtggctcttttcagcaaggacacgg
ccgcccagttacagcctgcgcctaggaaacattgtccacatctacccaccatggcagaat
ctggttgtggagggtgaacgttatcccataattctcaacacccacttcagtcagaaagtc
tgcgaagagactaagccggataacgcgggcggtccgagagccgcggtatctgtggagaaa
tgcagacctccgccgttaaccaggagcctgtggcggtcagggacgagccaagtgtcagcc
gagacatccattccctgtaaacaggtcggtgagttgaacagaagcgtagtgcggaagtct
ctgctggatgcagtggaggattgtggggcgtccggctctcagagcggtcctgttgaagtg
gttgttcagagggtctactgcatacccatcgccaagtccctacacagagattctctccag
cacagagcactctataaacctccaccagaatctgcaccacctcagcacatcggcaggttg
tgcgctcttgttcaggacagttacgggatgttcgctgaggttcttctgcaccgtgtgtcc
acagaatcggagatccagcagacttcggagcagctggagggacgtgtgtgtctcctccag
gacctgagagtcgttcagcgtctcacgcgtgacaaatgttctccgctcttcagtatgatt
gacagtttgtggcctcctccggttgatccaaaatctcccgatgatcttctgcagtctcgg
cgatcgagtcccacccggggtcacatggttcctctatcggggcggactgaatctccactg
tatcgagcgcctgtacttcagacgttaagagagatccttcagctcaaatgcaggggagag
agagagatgctgctgtttgtgacagatcccagtctccaaagggagccagacacagacggg
aacagaagaaccgtagccatgtgtctgaggccgtcctgcctgatccagagctcagtcaca
caggtcctggacgccctgcacacacaacctgtgctgatgttcagagacgccgtgaaggag
aatgctcagatattctgctgggaacagacggtgatccaactggaaccaaaggtcccgtcc
ttctccttaccacggcccatcatactggaccacctgggtccagaaaccctcccatactct
ctctgcactgtcacaggggtggttgtagcagtggatgaaagcacagccttctcctggccc
acctgtagccggtgtgagagctgccgcttagagactcgagaacaacagagaggattcgtc
tgcttagcgtgtggagcggtgatggatgaacccaccacgaagatgcagctggaggtgttt
ctgagctgctcttcactgagccgctgcacgtcaaaatcaagttgcagcaaaagaccattc
ggttacggtgtggaaaatgtgcttgggtcggagatcggtcctctctgcgtcttggtccac
gtggtcgacggaggtcccagcgcctggatgggtttggaggagtgtgacctgcgctga
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