Puntigrus tetrazona (Sumatra barb): 122330391
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Entry
122330391 CDS
T08985
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122330391
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122330391
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122330391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
FAM163
Motif
Other DBs
NCBI-GeneID:
122330391
NCBI-ProteinID:
XP_043083275
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Position
25:complement(401465..429432)
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AA seq
612 aa
AA seq
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MGCNLCSLQKREEHYKLLYEISQVNGRDLSRASHEEAVEALRSAKDPIVVQVLRRTPRPR
GQLVDVCTQTEITFEHIMALAKLRPVTPPVPDTCPFLLSDSGQEYFEGGEYLSNVTADAE
RTEELEYEEVELCRLSVQEKLGLTLCYRTDEDEDLAIYISEIEPNSVAARDGRIRQGDRI
LQINGRDVQDRQEAVGVLSNEECKNIVLLVARPEIQEEPWLEDEHSEFLEELKMEMLEEQ
RREEEEEEEEMKRAAREEDQARITQEESTMASCSYSQEKSLDPEQSVFTQIQKQLSRCLS
GRSSADGAEKLLELKCQIRNGGEYDLFYSSIQCSGVEHELRMLSEELRSIQMECQSIMKA
HQLGSRERPEKSDKDSSSAYNTAESSRSTPLVTERSPEHRRVSLANRRNLLTLRRAPSGS
PDHSNPSESEQTAEGPRPQSYLQLIQQQTALEFVSRPSEPKMEWKVKVRSDGTRYITKRP
VRDRLLRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEQRKQHLLRAKEQRRRREFMQ
RSRLESLRENPLSSGEGRPEPSIIELSHRKMMKKRNKKILDNWMTIQELMTHGEKAPEGS
AAHNAFLSVTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgtagcttacagaagagagaggagcactacaaactactgtacgag
atctcacaggtgaacggcagggatctgtccagggccagtcatgaggaggctgtggaggcg
ttacggagcgctaaagaccccatcgtggtgcaggtgctccggaggacccctcggccccgg
ggccagctggtggacgtgtgcacgcagaccgagatcaccttcgagcacatcatggctctg
gccaaactgcgtccggtcactcctcctgtccctgacacctgccccttcctgctgtccgac
agcggtcaggagtacttcgagggcggcgagtatctctctaacgtgacagcagacgccgag
aggaccgaggagctcgagtacgaggaggtggagctgtgtcgtctgagtgttcaggagaag
ctgggactgactctgtgttacaggacggacgaggacgaggacctggccatctacatcagt
gagatcgagccgaacagcgtcgctgcgagagacggacgaatccgacaaggagaccgtatt
ttacagataaatgggcgggatgttcaggacagacaggaagcagtgggcgttctctccaat
gaggaatgcaagaatatcgtgctgctggtcgcaagaccggaaatacaggaggagccgtgg
ctggaggacgagcacagcgagttcttagaggagctgaagatggagatgctggaggagcag
aggagagaggaggaggaggaggaggaggagatgaagagagcggcgcgagaagaagaccag
gctagaataactcaagaggaaagcacgatggcgtcctgctcctacagtcaggagaagagc
ctggacccggagcagagcgtcttcactcagatccagaagcagctgtcgcgctgtctgtcg
ggccggagctctgcggacggagcggagaagctgctggagctgaagtgtcagatccgtaac
ggcggcgagtacgacctgttctacagcagcatccagtgcagcggtgtggagcacgagtta
cggatgctgagcgaggagctacgcagcatccagatggagtgccagagcatcatgaaggcg
catcagctgggatcccgcgagcgtccagagaagtcagacaaggacagctcgagtgcgtat
aacacggccgagagttcacgcagcacacctctggtcacagagcgttctccggagcaccgc
agggtcagcctggctaaccgcaggaacctcttgactctccggcgggccccgagcggcagc
cctgaccacagcaacccctcagagtccgagcagacggccgagggcccgcggccccagagc
tacctacagctgatccagcagcagacggcgctggagtttgtgagccggccttctgaaccc
aagatggagtggaaggtgaaggtccggagcgacgggaccaggtacatcaccaagcggccc
gtccgggacagactcctgcgggagcgagcgctgaagatcaaggaggagcgcagcggaggc
atgaccaccgatgatgacgccatgagcgagatgaagatgggacgctactggagcaaagag
cagcgcaagcagcacctgctgagggccaaagagcagcggcggaggagagagttcatgcag
cggagccggctcgagagccttcgagagaacccgctgagcagcggagagggacgccccgag
cccagcatcatcgagctcagccaccgcaagatgatgaagaagaggaacaagaagatcctg
gacaactggatgaccattcaggagctgatgactcacggggagaaggctcccgagggatct
gcggcccacaatgccttcctctccgtcaccactgtatag
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