Puntigrus tetrazona (Sumatra barb): 122330528
Help
Entry
122330528 CDS
T08985
Symbol
si:dkey-219c3.2
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122330528 (si:dkey-219c3.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122330528 (si:dkey-219c3.2)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122330528 (si:dkey-219c3.2)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122330528 (si:dkey-219c3.2)
Coactivators
SAGA/TFTC/STAGA complex
122330528 (si:dkey-219c3.2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122330528 (si:dkey-219c3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122330528
NCBI-ProteinID:
XP_043083554
LinkDB
All DBs
Position
25:9530921..9564728
Genome browser
AA seq
942 aa
AA seq
DB search
MAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLGGQNKAVGSQGDTRRPSNAPNPHLGKLL
PAQVGTTLEQRQQPERNQEGNSQENGPDRIPASGAVPSTANLPSTSANSVTAANRVQYHS
SNPSTCSSDAAPTDSHPKTNHIASAVRPVPARIQTVNGSGGTLNSSVIASAPASVNGIDI
GSGVGNGKSNMSAPASTNTAFVSAQPNSTLPHANVSLDSQANPTIALHRPPNTITSVVHN
GGDPKVSGLSVQGSAGLVPFTNTEPKSDPQNQIKAIVPNQLPGTPVGLHPSTPAQIIVSS
SPVVTSLPVASTPSALAKPATTALVAQPTTLLRPGAPIQGTATATAQPRPGAPTTQLIVR
PQQQTTIQLPPGFTIPPGMVLVRTEAGQLALVPQQVLAQAKAQNQNKGTLSPRPVTPTAG
TAFRVTTPVAQQKTAVVTITSAQKPTTTVITAGARVQPAPQAVLKPSVTPQSPITTSAAA
PANRAPVLSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIEPEEF
TNRLQTELKSSPQPYLIPFLKKSLPALRLTLLNSQQSLTQLSQTSTTSTPLTVNTIKAPA
PSTLPTTVSTIRPATALAPSTAMAVKRPGVQATPTRMPVVITQTVRAQGAIGTPLQVRSP
MGVAVQASANQKQKLNDPGGGTFRDDDDINDVASMAGVNLNEENARILATGSELVGTQIR
SCKDEAFLPASLLHKRLLETAKKFGVTEVSMETVTLISHATQSRLRSMLEKVSAVAQHRA
DSCKDEELYEQASDVRTQLKFFEQLEKIEKQRKDDEERELLMKAAKSRSRQEDPEQARLK
QKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGASAGAEFPAGSSGSATGSTSS
STSSARQTRQRITRVNLRDLIFCLEQERTTARSMLLYKALLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtccccgatccgctggaagatatgctctactccgaagtggacgaaaaagca
gtcagtgacctcgtaggctcgttagaatcgcagttgggcggacaaaacaaggcggtcggt
tctcaaggcgacaccaggagaccctcaaacgcgccaaatccacacttggggaaattactg
cccgcccaagtaggaacaacactggagcagcggcagcagccagagcgaaaccaggaggga
aactctcaagaaaacggcccggataggataccggcgtccggggccgtcccgtccaccgcg
aacctgcccagcacctccgcaaattcggtcacagccgcgaaccgggtgcaatatcattca
tcaaatccatcaacttgttcaagtgacgcagcaccaacagactctcaccccaaaacaaat
cacattgcgtctgctgtccggccggttcccgccagaatacagactgtgaacggaagcggt
ggcacgttaaactcttctgttatcgcttctgctcctgcttctgtgaacggcattgacatt
ggttcaggtgtaggtaatggtaaaagcaacatgtctgctccagctagtacaaatactgct
tttgtgtccgctcagcccaacagcacactgccacatgcgaatgtgtcactagatagtcaa
gcaaaccccaccattgcactgcacaggcctcctaacaccatcacaagtgtcgtgcacaac
ggaggcgaccccaaagtctcaggattgtccgtgcagggctccgccggtcttgtgccgttc
acaaacacagagcccaaatctgaccctcaaaaccagattaaagccatcgtcccgaaccag
ctccccgggactcctgtagggttgcaccccagcacgcccgctcagattatagtgtcgtcc
agcccggtggtgacctcacttcctgtggcaagcacgccctctgccctcgcaaagccagca
acgactgctctcgtagcacagcctacgaccctgttgagacccggtgcgcccattcagggg
acggcgaccgcgacggcccagccgcgacccggggctcctacgacccagctgatcgtcaga
ccgcagcagcaaactaccattcagttaccgccgggattcaccattcctccaggtatggtg
ctggtacgcacggaggccggtcagctggccttggttcctcagcaggtcctggcacaggcc
aaagctcagaaccaaaataaaggcaccctctcaccgagacctgttacacccactgctggg
acggctttccgagtcaccacacctgtcgcccagcagaagacagcagtggtaacgattacc
tcggctcagaagcccaccaccacagtcattacagcaggggcccgtgtgcagcctgcacca
caggcagttctcaagccttctgtgacccctcagagtcccatcaccacctctgctgctgcc
ccagctaacagagcccctgtcctctctcaggaaatgcaagagaatgtaaagaagtgcaag
aacttcttagcaacgctcatcaaactggcatcccataattctccctcgccggaaacctct
cggaacgtgaaggcactagtgcaggatctgctggatgcaaaaatcgagcctgaggagttt
acaaatcgcctgcagacagagttgaagtcatctcctcaaccgtacctgatcccttttttg
aagaaaagcctgcctgctctgcgtctgactcttctgaactcccagcagtctttaactcag
ctgtctcagacctctactacatccacccctctgacggtgaataccattaaagctccagca
ccgagcacactgcccaccaccgtatctaccatccggccggctacagccctggctccctct
accgccatggctgttaagaggcctggggttcaggctactccgacacggatgccggtggtg
attacacagacggttcgtgctcaaggtgctattgggacacccttgcaagtgaggagcccc
atgggtgtggctgttcaagcgtcagccaatcagaaacagaagctgaatgatcctgggggt
gggactttcagggatgatgacgacatcaatgacgtggcatccatggctggtgtgaactta
aatgaggagaacgcccgtatcttggccacaggttcagagctggtgggcacccagatccgt
tcctgtaaggatgaggccttccttcctgccagcctgctccacaaacgtctcctggagact
gccaagaagtttggcgtgacggaggtgtcaatggagacggtcactctcatttctcacgcc
actcagtccaggctgcgctccatgctggagaaagtctcggctgttgcgcaacaccgcgcc
gactcctgcaaagatgaggagctctacgagcaggcgtcggatgtacggacccagctgaag
ttcttcgagcagctggagaagattgagaagcagaggaaagatgacgaggaacgggagctg
ctgatgaaagccgcaaaaagtcgctcgaggcaggaggatcccgaacaggctcggcttaaa
cagaaagctaaagagatgcagcagcaggaactcgcccagatgagacagcgggatgccaac
ctaacagcccttgccgccatcggaccccgcaagaaacgcaagcttgactctcctggggcc
tcagcaggtgcagagtttcctgcgggctcctccggatcagcgaccggttctacctcatcc
tccacgtcctcggcccggcagacccgtcagcgcattacccgggtcaacctcagggacttg
atcttctgcttggagcaggagcgaaccacagccaggtccatgctgctctacaaggccctc
ctgaagtag
DBGET
integrated database retrieval system
