Puntigrus tetrazona (Sumatra barb): 122330546
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Entry
122330546 CDS
T08985
Symbol
myo5ab
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122330546 (myo5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122330546 (myo5ab)
04131 Membrane trafficking [BR:
ptet04131
]
122330546 (myo5ab)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122330546 (myo5ab)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122330546 (myo5ab)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122330546 (myo5ab)
mRNA cycle factors
P-body specific factors
122330546 (myo5ab)
Membrane trafficking [BR:
ptet04131
]
Others
Actin-binding proteins
Myosins
122330546 (myo5ab)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122330546 (myo5ab)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122330546 (myo5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122330546
NCBI-ProteinID:
XP_043083591
LinkDB
All DBs
Position
25:complement(4317113..4332213)
Genome browser
AA seq
1827 aa
AA seq
DB search
MAAPELYSKFARVWIPDTTEVWRSAELTKDYKPGDSVLHLQLEDETEFEYKLEPKSGVLP
PLRNPDILVGENDLTALSYLHEPAVLHNLRVRFTDSKLIYTYCGIILVAINPYESLPIYG
SDIINAYSGQNMGDMDPHIFAVSEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSAESSVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRKHHIVGANMR
TYLLEKSRVVFQAYEERNYHIFYQLCACAHLPQFEPLKLGSADDFPYTNQGRSPVIKGVN
DLKEMEATRKAFSLLGITEAHQMGLFQILSAILHLGNVVVKERGSSSCSTSDESGHLAVF
CDLTEVSYESMAHWLCHKKLKTATETLNKPVTQLEAINGRDALAKHIYAKLFSWIVGQVN
KSLSTSSKPHSFIGVLDIYGWVRCYYFIFVLYRLNFGYRKFTVVPRFETFEVNSFEQFCI
NYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKMGLLDLLDEECT
MPKGSDESWAQKLYNTHLKKSSHFEKPRMSNRAFIILHFADKVEYQCDGFLEKNKDTVNE
EQINVLKASKFALLVELFQDEETPAALSTTAPSGRAKVGRSMQSFREHKKSVGLQFRNSL
HLLMETLNGTTPHYVRCIKPNDVKAPFMMDPHRAVQQLRACGVLETIRISAAGFPSRWTY
QEFFSRYRVLMRQKEILSDRKLTCQSVLERLVQNKDKYQFGKTKIFFRAGQVAYLEKLRA
DKLRTACIHIQKTIRCWLARKKYLRIRQATITLQRYTRGHQARCLCKTLRRTRAAVIFQK
YTRMWAARRQFLRQREAAVFIQRLLRGYAARLEYKRLVCEHKALLIQRWVRGFLARWRFR
RIKRAVVCLQCSVRRMLARRELKKLKIEARSVEHYKKLNFGMENKIMQLQRKLDEQHKEN
RELSEQLRQVESYSAAELEKLHVQLKTLEEAEEESRHRGDLVTSLQEELELVRQELEKNK
ELVAELNEKNTLLKSEKDEMNRLIQEQEQQITEKSESVHEEVTEHLQAQLNKERFNYQNL
LTEHLKLEERYADLRSEKEAAVELSKPGHNLADSGYGSSQSESVHSSVLIGSEVSSLNRE
EAGQTAADVSLLLKLQRRVAELEKEKIDLQGEMDIKEEQLQLEQTKELNDCQKVLGAERD
HEALKRQELESDNKKLKKDLQELRQSLSKGSGSKVASPGGQAYKVLLEQLNSTTEELEMR
KEEVLILRSQLVNHEAFKHKETGIEGDSGDSSRSPTLDLHELNEDGELWMAYESLKETNR
ILESQLQTQGQSHEKEVEGLRAELQRYRAELDQQQQMLSDSLELPHDARIQASLQHEISR
LTQQNMDLLEQMGKQDKMVRKLKKHLKIYMKKFGEAEGVHMEQSSPENVVGESGRTISIV
RKERDFQGMLEYRREDESKLFKILITELKPRGVAVSLVPGLPAYILFMCLRHADYANDDQ
RVSTLLNSSINCIKNVLKKRGDFENISFWLANTCRLLHCLRQYSGEETYTKHNTPRQNEH
CLTNFDLSEYQQVLSDLAIQIYQQLIRVIENILHPMIAPAMLEQETIQGVMGVKPTGMRK
RTTSFREENSHSLESILKQLDMFYYTLLQHGNDINLARQVIKQQFYVICSVTLNHLLLRK
DMCSWSKGLQIRYNVCQLEEWLLDKDLQGSGARESLEPLIQAAQLLQIKKKSQDDADAIC
TMCTALTTEQIVKILSLYTPVNEFEERVTISFIKSVQTLLKDRKESSQLLMDAKIIFPVT
FPFNPSPVALETIQIPGSLNLNFLTQV
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggagctgtactcgaagtttgctcgagtctggatcccagacaccacagag
gtgtggagatcagcagagctcaccaaagactacaagcccggagactctgtcctacactta
cagctggaggatgagacggagtttgagtacaagttggagccaaaaagtggtgttctgcct
cctcttcgtaacccggacatcctggtgggcgagaacgacctcacggctctcagttacctc
catgaaccagccgttctgcacaacctccgggtccgattcactgactctaaactcatctac
acctactgtggaatcatcctggttgccatcaatccatatgaaagtcttccaatctatgga
tcggatatcatcaatgcatacagtgggcagaacatgggtgatatggaccctcatatcttt
gctgtgtcagaggaggcctataaacagatggccagagacgagaagaatcagtccatcatc
gtgagcggagaatctggtgcagggaagacggtttctgctaaatatgccatgcgttacttc
gccacggtcagcggctcctctgctgagtccagcgtggaggagaaagtgctggcgtccagc
cccatcatggaggctataggaaacgccaagacgacgaggaatgacaacagcagtcgcttt
gggaagtacattgagatcggatttgacaggaaacaccacatcgttggagccaacatgagg
acgtaccttctggaaaagtctagagtggtgtttcaggcgtatgaggagagaaactatcac
atcttctatcagctctgtgcctgtgcccatttacctcaatttgaacctcttaaattaggt
agcgctgatgactttccctacactaaccaaggcagaagtccagtcatcaagggagtgaat
gaccttaaggagatggaagccacaaggaaagccttttcactactgggaattactgaggca
caccaaatgggtttattccaaatcctgtcagccattcttcatctggggaatgtggtggtg
aaggagagaggatcatctagttgttctacctctgatgaaagcggccaccttgcagtgttt
tgtgacctcactgaggtgtcgtacgagtccatggctcactggttgtgccataaaaaactc
aagaccgccacagaaaccctaaacaaacctgttacccaactggaagccataaatggccgt
gatgctcttgcaaaacacatatacgccaagctcttctcatggatcgtcggccaggtcaac
aagtccctaagcacttcctccaaaccgcactctttcatcggtgtcctagacatttacggg
tgggtgaggtgctattatttcatcttcgttctttaccgattaaatttcggttacaggaaa
tttactgttgtgcccaggtttgagacattcgaggtgaacagcttcgagcagttctgcatc
aactacgccaacgagaagctccaacagcagtttaacatgcacgtgttcaaactggagcag
gaggagtacatgaaggagcagataccgtggacgctcattgatttctacgacaaccagccg
tgcatcaacctgatcgaggctaagatgggcttgctagaccttttagatgaagaatgcact
atgccaaagggttcagatgaatcatgggcgcaaaagctgtacaacactcacctaaagaaa
agctctcactttgagaagccgcgcatgtctaacagggccttcatcatacttcactttgca
gacaaggtggaataccagtgtgatggatttctggagaaaaataaagacacagtcaatgaa
gaacaaattaatgtgctgaaggctagtaagttcgccttgctggttgagctctttcaggat
gaggaaacacctgcagctctgagcaccacagcaccatcgggtcgtgccaaggtcgggcgg
tccatgcagtcttttagggagcacaagaagtcagtgggactgcagttccggaactctctg
cacctgcttatggaaacactgaacggcacaaccccacactatgtgcgctgcatcaagcca
aatgacgttaaagcccccttcatgatggacccccatcgagccgttcagcagctcagagcc
tgtggagtcctagagaccattcgcatctcagctgcaggcttcccttcaaggtggacttat
caagagttcttcagccgctaccgtgttctaatgaggcagaaagaaatcctctcagacagg
aagttgacctgccagagtgttctagaaagactagtgcagaacaaagataaataccagttt
ggaaaaacaaagatcttcttcagggctggacaggtggcttacctggaaaagctaagggct
gacaaactccgtacggcctgcatccacatccaaaaaaccatccggtgctggctcgcccgc
aagaaatacctccgtattcgccaagcgaccatcactttgcagagatacacgagaggacac
caggctcgatgcttgtgcaagacactgagaagaacacgggctgcagtgatcttccagaag
tatacacgcatgtgggcagccagacgtcagttcctgcgacagagagaagcagcggttttc
attcagaggttgctgcgtggctatgcggccaggctggagtacaaacggttggtgtgtgag
cacaaggctttactgattcagcgctgggtgcggggcttcctggcccgctggcgcttccgt
cgaatcaagcgggctgtggtgtgtctgcagtgttctgtgcgcaggatgctggcccgtcga
gagctcaagaaactcaagattgaagccagatcggttgagcattataagaagctcaacttc
ggcatggagaacaagatcatgcagctgcagaggaaactggatgagcagcataaggagaac
cgcgagttatctgagcaactgaggcaagtggagagctacagtgctgccgaattggagaag
ttgcatgtgcagctaaagactcttgaagaggcagaagaggaatctcgtcaccgcggagac
ctggtgacatcattacaggaggagctggaattggtccgccaagagctggagaagaacaaa
gagttggtcgctgaactgaatgagaagaacacactgctgaagagtgagaaagatgagatg
aacagactgatccaggaacaggagcagcagataacagagaagtcagagtcggtccatgag
gaggtcacagagcaccttcaagcacagctgaataaggaacgcttcaattaccagaacctt
ctgactgagcacctgaagctggaggagcgctacgctgatctgagatcagaaaaagaggca
gctgtagagctctccaaacccggtcataacctagccgactcgggctacggcagcagccaa
tcagagagcgtccacagctctgtactcatagggtcagaggtcagctcgctcaacagagag
gaagctgggcagacggcagctgatgtttccctgctgctgaagctacagagacgagtcgct
gagctggagaaggagaagatagacctgcagggtgagatggacatcaaagaagagcagcta
caactcgaacaaactaaagaactgaacgattgccagaaagtgctaggggctgagagagac
catgaggctctaaagcgccaggagctggagtctgataataagaagctgaagaaagatctt
caggagctccgccagtccctcagtaaggggtcggggtcaaaggtggcatcccctggaggt
caggcatataaagtactcctggagcagctcaactccaccactgaagagcttgaaatgcga
aaggaggaagtgctcattttgcgatctcaactggtcaaccacgaagcatttaaacataag
gaaacaggaattgaaggagattcaggtgactcaagcagatcgcctacactggaccttcat
gagctcaatgaggatggagaactctggatggcttatgagagcttgaaggaaactaatagg
attctagagtcacagttgcaaactcagggacagtcccatgagaaggaggtggagggtttg
agggcggagcttcagcgatacagggcggagcttgatcagcagcagcagatgctgtcggac
agcttggagcttcctcacgacgctcgaatacaagcaagcctgcagcacgagatcagtcgc
ctcacgcagcaaaacatggaccttttggagcagatggggaaacaggacaaaatggtccgc
aaactaaagaaacacctgaaaatttacatgaaaaagtttggggaggctgagggtgttcat
atggagcagtcctctccagagaacgtggttggcgagagcggtcgcacaatcagtatcgtt
cgcaaagagagagatttccagggcatgctggagtacagaagagaagatgagagcaaactg
ttcaagatactcatcacagagctcaaaccccgaggtgtggcggtgagtctggtcccaggt
ctgcctgcttacattctcttcatgtgtctgagacacgcagactacgccaacgatgatcag
cgtgtctccaccctgctgaactcctccatcaactgcataaagaacgtgctgaagaaacgg
ggagattttgaaaacatttccttctggttggcaaacacctgtcgcttgttacactgcctg
aggcagtacagtggagaggagacatacacaaagcacaacacgccccgacagaacgaacac
tgtctgacgaactttgacctctctgagtaccagcaggttttgagcgacctggctattcag
atctaccagcagctcatcagggtcatagaaaacattttacaccccatgattgccccagcc
atgttggagcaggagactattcagggtgtgatgggcgtgaagcccacaggaatgaggaag
cgcacaaccagtttccgtgaggagaactctcactccctggagtccattctgaagcagctg
gatatgttttattacacgctgcttcagcacggcaacgacatcaatctcgcccggcaggtc
atcaaacagcagttctatgtaatctgctctgtcacactcaaccacttactgctccgcaag
gacatgtgctcctggagcaaaggcctgcagatcaggtataatgtgtgtcagctggaggaa
tggttgctggataaagatcttcagggcagtggagcgcgtgagtctttggagcctctgatt
caggcggctcagcttctgcagatcaaaaagaagagtcaggacgacgcagacgccatctgc
accatgtgtacagctctcaccactgaacagattgttaaaatcctcagcttgtacacacca
gtgaatgagtttgaggagagagtgactatatcattcataaagtctgtacagactttatta
aaggaccgtaaggagtcttctcagttactgatggatgctaagatcattttcccagtcact
ttccccttcaacccttcaccggtggcccttgagaccatccagatccctggcagcctcaac
ctgaacttcctgacacaagtttaa
DBGET
integrated database retrieval system
