Puntigrus tetrazona (Sumatra barb): 122330620
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Entry
122330620 CDS
T08985
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122330620 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122330620 (myo5c)
04131 Membrane trafficking [BR:
ptet04131
]
122330620 (myo5c)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122330620 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122330620 (myo5c)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122330620 (myo5c)
mRNA cycle factors
P-body specific factors
122330620 (myo5c)
Membrane trafficking [BR:
ptet04131
]
Others
Actin-binding proteins
Myosins
122330620 (myo5c)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122330620 (myo5c)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122330620 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
Csm1_N
AAA_22
nSTAND3
AAA_16
Myosin_N
Motif
Other DBs
NCBI-GeneID:
122330620
NCBI-ProteinID:
XP_043083715
LinkDB
All DBs
Position
25:3018148..3037845
Genome browser
AA seq
1742 aa
AA seq
DB search
MALSELYTKYNRVWIPDAENVWKSAEILTDFKPGDTVLDLQLEDGTELQYPLEGGGKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISSDKRYQIIGANMRT
YLLEKSRVVFQSDNERNYHIFYQMCACANQPEFKGLRLLGADRFNYTRLGGETEIEGVDD
RADMTETRRTFSLLGLKDSFQADVFKVLAAILHLGNVVIKENGSEKSSIGSRDPHLAIFC
ELMGVNMDNMCRWLCHRRIVLSAETVVKPQPRERAINGRDALAKHIYSHLFDYVIHKINQ
ALMVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNFLGSKPLFEKPR
MSNDSFVIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRASQFAVLADFFKEEEPNSGHK
TIKVTPAHPRVKASNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSELKLGEKKQTCKTVLQ
KLIPDSDQYKFGRTKIFFRAGQVAYLEKLRLDHLRAACVTIQKHARGWRQRRRFLHMRQA
AITIQQYVRGKKQIRRTVTALALKQGWAAVVIQRHCRGYLVRTIYQLILRAAVTIQAFTR
GWRARRRYRKMVAEHKALVLQKYARAWLARRRFQTMRRLVINVQLSYRVQQLRKKIEEQN
KENLGLVERLTSLSNARTQGLERIQTLEVELGKLTNEKAAFEERARTNSEEANQAIALLQ
SDKEKLTETNKALEKKLKDTTLQMQDQFEDVKRKLMEDLEREERLRKVAEHNGELQKEDS
DKEIVVLKEESRRLREERIRLQTQVEEDGKVNAELQEQVLQLSKHVKVIPDLRKEINSLQ
MQRAEADKTTRSQNLQTRAKMSLITRQLLGEAKGENLIQRLNEEALDHDDGADLLTAFDA
MEKAAKGMETQLREQKDTYESQLETLVFKNEHLNKENEQLQALFQEKSDVNQSIGQEVAR
LAAENMVIPELKQQVSELNRHKQELETQLQDQSSEMSAKIKELSSELQLTVEEERSQRRH
LEEKITESERRREEMERQMADLQEENEQIQKAQLSESEAKNKLRQETSRLTAENMDFEEQ
LDMKDRLIKRLQDQVKALQTNVTANQKAAPTGPKEYLGMLEYKKEDESRLIRTLILELKP
RGVGVHMIPGLASHLLFMCVRHADYLNDGNKLKSLMNGIISAIKEVITNRQESCELLSFW
LSNTYHFLNCLKQYSGDEEFMKHNTPRQNKNCLMNFDLSEHRQILSDLAINIYHQFISVM
EDALFPMIIPGMLEHESLQGISSMKPTGFRKRSSSVYEDGDGSEAFSVSSILQQLDSFHT
GMEQHSMEPQLKGQVIRQLFFLIGSTSVNSILLRKDLCSCRKGMQIRCNISYLEEWLREK
DLQSSSAMETLGPLSQVAWLLQVNKTTDEDAAEIKQRCSELSPVQIVKILNSYTPIDDFE
KRITPSFVRKVQTLLQEREGSSQLMMDSQYRFQVTFPFCSSPQALELLQVPSSLHLGFVT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtccgagttgtatacaaagtataacagggtttggatccctgacgcggaaaat
gtttggaaatctgcggagattctgacggatttcaagcctggtgatactgtgctcgatcta
cagctggaggatgggacggagttgcagtatccgctggaaggaggtgggaagctgccacct
ctccgtaacccagacatcctggtgggtgagaatgacctcacggccctcagttaccttcac
gagccggccgtgcttcacaaccttaaagtccgatttgtcgagtccaaaatcatctacacc
tattgtggaatcatcctggtggcagtcaatccatacaagcagcttcccatctatggagat
gcggtcatccatgcctactctggtcaaaacatgggcgacctggaccctcacatattcgct
gtggctgaagaggcctacaaacaaatggccaggaataacaagaatcagtccatcatcgtg
agcggtgagtccggggctggaaagaccgtatccgctcgctatgctatgaggtacttcgcc
gttgttagcaaatctggcagcaaaactcgggtggaggacaaagttttggcatctaacccg
ataactgaggccattgggaatgcaaaaaccaccaggaatgacaacagcagccgattcggg
aagtacaccgagatcagctccgataaacgataccaaatcatcggtgccaacatgaggacg
tacctcctggagaagtcaagggtggtttttcagtcagacaatgagagaaattatcacatc
ttctaccaaatgtgtgcatgtgcaaatcagccggagtttaaaggcttgagactgttggga
gcagacaggtttaattacacacgtctgggtggagagaccgagatcgagggtgtggacgac
cgcgctgacatgacagaaacacgcagaaccttcagtctgctaggtcttaaggacagcttc
caggcggatgtgtttaaggtgctcgctgcgattctgcatttgggaaacgtagtaatcaaa
gagaacggctctgagaaatcatccatcggctccagagaccctcacctggccatattctgc
gagctgatgggtgtcaacatggacaacatgtgccgctggctgtgtcacagacggatagtg
ctgtcagcggagacggtggtgaaacctcagccccgggaacgtgccatcaacggccgcgac
gcccttgccaaacacatctactcccatctcttcgactacgtcatccacaagatcaatcag
gcactaatggtccctgggaaacaacactcatttatcggggtgttggatatttatggattt
gagacctttgacattaacagttttgagcagttctgcatcaactacgccaacgagaagctg
cagcagcagttcaacctgcacgtgtttaaactggagcaggaggagtacatgaaagaggac
ataccatggacgctgatcgatttctatgacaaccagcccgttattgatctcatcgaggcc
aagatgggcattctggaccttttagatgaagagtgtctgttcccacagggcactgataaa
aactggctgcagaagctgtacaattttctaggctcaaagccgctgttcgaaaaaccccga
atgtcaaatgactcttttgtgatccaacattttgccgataaggtagaataccagtgtaaa
ggtttcttggagaagaacagagacactctttatgaagagctggtggacatcatgcgtgcc
agtcagtttgctgtcttggccgatttctttaaagaagaggaaccaaattctggccataag
actattaaggtgactccggcacatcccagagttaaagcttcaaacaagcagctgagaacc
actgtaggagacaagtttcgaagttctttgtacctgttaatggagacgctgaacgctact
acgcctcattatgtgcgctgcattaaacccaatgaagagaaactgccatttgaatacgac
tcgaagcgtgtggtgcagcagctgagggcctgtggtgtgctggagaccattcgtatcagc
gcccagagctacccgtccaggtggacatatatagagttttacagccgttacagtatcttg
atgagccagtcggagctgaagctgggagagaagaagcagacgtgcaagacggttctacag
aaactcattcctgattccgaccagtacaagttcggtcggactaagatcttcttcagggcg
ggacaggtggcgtacctggagaagctgcgcttggatcatcttcgcgcggcttgtgtgacc
atccagaagcacgcgaggggctggaggcagagacgcaggttccttcacatgagacaagct
gctatcacaatccagcagtacgtgcgtgggaagaaacagataagacgcactgtgaccgct
ctggcgctgaagcagggctgggccgctgtggtgatccagagacactgccgtgggtatctg
gttcggacgatttaccagctcatcctgagggctgcggtcaccatacaggccttcaccaga
ggatggagggctcgcaggcgctacagaaagatggtggcagaacacaaggctctggttctg
cagaaatacgctcgagcttggctggcgcgccgacgctttcagaccatgagacggctggtc
atcaacgtgcagctgtcgtaccgagtccagcagctgcgcaagaaaatagaagagcagaat
aaagagaatctaggcctcgtggaaagactcaccagtttgtctaatgcacgtactcaagga
ctagaaaggattcagactttggaggtggagcttggaaagctaaccaatgagaaggcagct
ttcgaggaaagggcgagaacaaactccgaagaggccaatcaggcaatcgctttgcttcag
agtgacaaagagaaactaactgagaccaataaggctttggagaagaaactgaaagacacg
accctgcagatgcaagatcaatttgaggatgtaaagagaaaactgatggaagacttagaa
agagaggagagactcagaaaggtggcggagcacaacggtgaactccagaaggaagactcg
gataaagagatcgtagttctgaaagaggaaagccgtagactgagagaggagcgaatcagg
ctccagactcaagtggaggaagacgggaaggtcaatgcagaactgcaggaacaagtgctg
cagctctccaaacacgtcaaggtcataccagatttacggaaagaaatcaacagcctgcag
atgcagcgagctgaagctgataaaacaacgagatctcagaatctacaaaccagagctaag
atgagcctgatcacgaggcagctgctcggtgaagctaaaggggaaaatctcattcaaagg
ctgaatgaagaagccttagatcacgatgatggagctgatcttctgactgcgtttgacgcc
atggaaaaagccgctaaagggatggaaactcagctgcgggagcagaaggacacctacgag
agtcaattagaaactctcgtgtttaaaaacgaacatctaaacaaagagaacgagcagctt
caggctctctttcaggagaagagtgatgtcaaccaaagcatcggacaggaagtggcccgc
ctcgctgccgagaacatggtgattcctgaactaaagcagcaggtgtcagagttgaaccgc
cacaaacaagagctcgagacccagcttcaagatcagagctctgagatgagcgcaaaaata
aaggagttatcaagcgagcttcagctcaccgttgaagaggagagatcgcagcgcagacac
ctggaagagaagattacagagagcgagaggagaagagaagagatggagagacagatggct
gacctccaggaggagaacgagcagatacagaaagcccagctctcggagagcgaagccaag
aacaaactccgacaggagacctcgcgcctcacagctgagaatatggacttcgaggagcag
ctggacatgaaggacagactaataaaaagactccaagaccaagtcaaagcccttcagaca
aatgtgacagccaatcagaaagcagcaccgaccgggcccaaagagtacttgggcatgttg
gagtacaagaaggaggatgaaagcaggctgatccggacgcttatactggagctgaaacct
cgcggtgtgggtgtgcacatgatccctggtctggcttcacatctcctcttcatgtgtgtg
agacacgccgattacctcaacgacggaaacaagctcaagtctctcatgaacggcatcatc
tcagccatcaaagaggtcatcacgaaccgacaggagagttgtgaacttctgtccttctgg
ctctcgaacacatatcacttcctcaactgtctgaaacagtacagcggggatgaggagttc
atgaagcacaacactccccgtcagaacaagaactgcctgatgaacttcgacctttcagag
caccggcagattctcagcgacctcgccatcaacatctaccatcagttcatcagcgtgatg
gaggacgcgctctttcccatgatcatccctgggatgctggagcacgagagtctccaggga
atctccagcatgaagcccaccggtttccgcaagcgctccagcagcgtgtacgaggacggc
gacgggtcggaggcgttcagcgtgagctccatcctgcagcagctcgactcgttccacacc
ggcatggagcagcacagcatggagccgcagctgaaggggcaggtcataagacagctgttc
ttcctcatcggatccacgtcggtcaacagcatcctgctccgcaaggacctgtgctcctgt
cgcaagggcatgcagatcaggtgtaacatcagttatctagaggagtggttgcgagagaag
gatcttcagagcagcagtgctatggaaacgctggggccgctctctcaggtcgcctggctt
cttcaggtcaacaagaccacagatgaagacgcagccgagatcaagcagagatgctccgag
ctctctcccgtgcagattgtgaaaatccttaactcgtacacacccatcgacgatttcgaa
aaacgcatcactccgtccttcgtccgcaaagtccagacgctgctgcaggagcgtgagggc
tcttctcagctcatgatggattcacagtatcgcttccaggtcaccttccccttctgctcc
tcaccgcaagcactagagctcctgcaggtgcccagcagcctccatctgggcttcgtcacc
cgcatttga
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integrated database retrieval system
