Puntigrus tetrazona (Sumatra barb): 122330621
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Entry
122330621 CDS
T08985
Symbol
hps5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122330621 (hps5)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
122330621 (hps5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
WD40_CDC20-Fz
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
Beta-prop_RIG_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
122330621
NCBI-ProteinID:
XP_043083716
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All DBs
Position
25:complement(2303341..2321372)
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AA seq
1127 aa
AA seq
DB search
MIPVVPVESCTHVLAEFDCLDPLLSALRLDSGRIKCTCLSVSRKWLALGTSAGGLHLIQR
DGWKQKLILTHKEGSVTQVSCCPHDEDFIAVATSQGLVVVWELHLERRGRPERVSVSWEH
RGQTVTSLYWDTAALRVFAGDVGGKVSCVRAGSSKLGKGSAFVIFPIQTITTVDSRVVQL
GYSDGHLVVSSLSRCYLCDTEREKFWRVGNKERDGEFGACFLSQGPAGQRGQALLYCARP
GSRIWEASFSGEVLSTHQFKQLLACPPLPLVSYKNEPLFNSAQTSPQSLAFPRLLQFGDQ
NLLTWTDSAIYIFTPHSGQVLLWTEVKDVVEISVFRNELFCLHGDGRLSHLSLMSPERCV
ERLIKRENWTLATTVCCMFQHAIITSKARKSLPVDRLEQLKAQLNSASQQQLIGQLEEVI
GKLEPLDSACSSRRSSISSHESFNVLDCGIYRVISRRGSQSDDDASSLANQSMLEEERLK
EFSFTEEEQVENDSQSVRGEGDRSDLSLQFLPLPFRSKPPRVALQAVRDSVSSFVKKTTE
KINTLQMNTDLWPRPDLREGVQGEVTATATPLPEEVEHELNAEQSSSESELQELRTATKK
AISQIQDPMVLLDPVCLSDVLREWAPVLERVLGPEDHISLTEITTQEEKTLEEEELVSSM
SCCVVVQPDTYSANLDKPATLTEEDDDCGESSPCSTAPVRAPFPPLANHVELIQLFSPKP
LPPDLQADLSQLACLYLEMGCPGRGGIESVCVFLRRYFFLLDQERVRKMCMLRYREHREV
MKAYIAGMLEFTQASKVVEVIQKGDLLKSLRSLRELQPWNAPLLLSHLYRLYDKHGEVAV
RAYPQFYPTILPSDVMVMALPSHFLPYLDNLVQSRAEQQRLSFLGSLFQPETLRQDWLEL
ALSHDAPQKDDTLTADGQPRWHSHFFSWGYGRLLSLLIRLPADLASKQKMLEMCRAYGYW
MGYLYLCRELQRRPEAFSAICRLDDMTLLEGDDGIAPQSLDEWVLLLQLSQQISSSNEAP
PPPAPSGGPDRSCSEDTNGTSDSSPDLSDASTDWSIRISPENIILCLVRVFGPDRALAAL
QERGIQVDLSSRSTLVCDLLRMAEKRQRALLQTMLERCDRFLWSQHA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtggttcccgtggagtcctgcacacatgtcctggcagagtttgactgtctg
gacccgctcctctctgccctgagactggactcgggacgaatcaaatgcacatgtctctcc
gtgtccaggaagtggttggctctgggcacgtctgccggagggcttcacctcattcagaga
gacggctggaagcagaaactcatcctcacacacaaagaaggctcagtcacgcaggtgtca
tgctgcccccatgatgaagactttatcgctgtagcaacaagtcagggtttggtggtggtg
tgggagctgcatttagagcggcgtggccgtcctgagcgcgtctctgtgtcctgggagcac
cggggacagacggtaacatctctgtactgggacaccgccgccctccgagtgtttgctgga
gatgtaggagggaaagtgtcctgcgtccgggcggggtcgtctaaactcgggaagggctct
gcgtttgtgatcttcccaattcagaccatcactacagtggattcgcgtgtcgttcagctg
ggctactcggacggacacctggtggtctcgtctctcagccgctgctacctgtgtgacacc
gagagggagaagttctggcgcgtgggtaataaagagcgagatggagagttcggggcatgt
tttctctcgcagggtccggcgggtcagcggggtcaggctctgttgtactgtgcccggccc
ggctcccgcatatgggaggccagcttcagcggagaggtcctgagcacacaccagttcaaa
cagctgctggcctgcccaccgctgcccctcgtctcttacaagaatgagccacttttcaac
tctgcacagacgagtcctcagtctctggctttcccaagactcctccagtttggtgatcaa
aacctgctcacttggacggattcggccatctacatcttcacccctcacagcggtcaggtg
ctcctgtggacagaggtcaaagatgtggtggagatttcagttttccgtaatgagctgttt
tgtctgcatggtgacggacgtttgtctcacctgtctctgatgtcacctgagcgctgcgtg
gagcgtctgataaagagggagaactggaccctcgccaccaccgtctgctgcatgtttcag
cacgccatcattacatccaaggccaggaagtccctccccgttgatcgcttggagcaactt
aaggctcagctaaactccgcctcccagcagcagctgattggtcagctggaggaagtgatc
ggcaaactggagccgctggactccgcctgcagcagccgcaggagcagcatttcctcacac
gagagcttcaacgtcctggactgcggcatctaccgcgtcatcagccgaagaggcagccaa
tcagacgacgacgccagctccctcgccaaccagtcgatgcttgaggaggagcggctgaag
gagttcagtttcaccgaggaggagcaggtggagaacgactctcagtccgtgcgtggagag
ggcgacaggtcagacctcagcttgcagtttctgccgctgccttttcgctcgaaaccccca
cgagtcgccctgcaggctgtccgagacagtgtctcgagctttgtgaagaagaccacggag
aagatcaacactcttcagatgaacacagacctgtggcctcggcctgacctcagggaaggg
gttcaaggggaagtcacggccacggcgacccctcttccagaagaagttgagcacgagtta
aacgctgagcagtccagctccgagtctgagctgcaggagttgaggaccgccacaaagaaa
gccatctctcagatccaggaccccatggttttactggaccctgtctgtctaagcgatgta
cttcgagagtgggctccggttctggagagggtcctgggtccggaggatcacatcagcctt
acagaaataacgactcaagaggagaagactctggaggaggaagagcttgtttcgtcgatg
tcctgctgtgtcgtggttcagccagatacctactctgctaacctggataaacctgcaacc
cttactgaagaagacgacgactgtggagagagcagcccttgttccaccgccccggtcaga
gctccgttcccgcctctggccaatcatgtcgaactaatacagctgttttcccccaaaccg
ctgccccctgacctccaggccgacctctcgcagctggcctgtctttatctggagatgggc
tgtcccgggagaggaggcatcgaaagcgtgtgcgtgttcctcaggaggtacttcttcctg
ttggaccaggagagagtgaggaagatgtgcatgctgcgttacagagagcaccgcgaggtg
atgaaggcgtatattgctggcatgctggagttcactcaggccagtaaggtggtggaggtg
attcagaaaggcgacctgctcaagtctctgcgcagtctgagagaactccagccctggaac
gctcctctgctgctctcgcacctgtacagactctatgataaacacggagaggtggctgtt
cgagcctacccacagttctatcccacaatcctcccctctgacgtcatggtcatggcttta
cccagccacttcctgccttatctggacaatttggtccaatcccgagccgagcagcagcgg
ttgtctttcttgggctctcttttccagccagaaaccctgcgacaggattggctggaactg
gcactgtcccatgatgccccacagaaggatgacacgctcactgctgacggacagcccagg
tggcactctcatttcttcagctggggttatggtcgtctgctgtctctgctgattcgtctg
cctgctgatctggcctccaaacagaagatgctggagatgtgcagagcttacgggtactgg
atgggttacctgtacctgtgcagagagctgcagcggcggcccgaggctttcagtgccatc
tgcagactggacgacatgacactactagagggggatgacggtattgcacctcagtctctt
gatgagtgggtgttgcttctccagctctcccagcaaatcagctcgagcaacgaagccccg
ccccctccagccccatccggcggccccgatagatcctgttcagaagacactaacggcacg
agcgatagttctcccgacctatcagacgcgtcgaccgactggagcattcgcatcagcccg
gagaacatcatcctgtgtctggtgcgggtcttcgggccggaccgggccctggcggccctc
caggagcgcgggatacaggtggatctcagttcacgctccaccctggtctgcgatctgctt
cgtatggctgaaaagcggcagagagcactgcttcagaccatgctggagcgctgcgaccgc
tttctgtggtctcagcatgcttga
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