Puntigrus tetrazona (Sumatra barb): 122330718
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Entry
122330718 CDS
T08985
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122330718 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122330718 (cnot2)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122330718 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122330718 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122330718
NCBI-ProteinID:
XP_043083899
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Position
25:complement(10518318..10526819)
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AA seq
520 aa
AA seq
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MFSATRKKFVEGVESDYPDESIYYGQPSMFPHRSEKDMLPSPSPSSSGQLSQLGASLYGP
QSALGFSIRGMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNTRN
MMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGRS
QGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAGRAPYVG
MVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSLNSSGKGSSSADGPKFPGD
KTSSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYY
FFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcaacgagaaagaagtttgtggagggggtcgaaagtgactaccctgatgag
agcatatactatggccagccgtcaatgttcccgcatcgatcggagaaagacatgctgcca
tctccctcgccgtcatcgtcaggtcaattgtcacagcttggtgcgagtttgtacggtccg
caaagtgcactaggtttctcaataaggggcatgagcaacaacaaccctcaattgaaccgg
agtttaacacaaggcactcagttaccgagccatagcaccccaacaacaggcgtcccaaca
atgtccctccacacaccaccttcgccgaacaggggcatcttgcctatgaacaccaggaac
atgatgagttcgcaggtagggcaaggcatgggcatgagcggcaggaccaacagcatgggc
agctctggcctgggtagccctaaccgcagctctcccagcattatctgcatgcccaagcag
cagccagcacgccagccattcaccatcaacagtatgtcaggatttggaatgggccggagc
caggggtttggcatgaactccttatccaataacatcttcaacgggacagatgggagtgaa
aatgtgacaggaatagacctctcagaattcccagcacttgcagacagaagtcggagggag
ggaaacggcaacccaacaccgttgcataatccgctggctggaagggcaccctatgttgga
atggtcacaaagccatcgaacgaacagtcgcaggacttttccattcacaacgaagacttc
ccagccctgcccgggcccaactacaaggacccaacattgagcacggatgaaagcaaatca
agcttgaactcttcaggaaagggcagctcaagtgcagatggacccaagtttcccggcgac
aagacatcatcagcacagaataacaaccagcaaaagaaggggatccaggtgttgcctgat
ggcaaggtaacaaacattccctcaggaatggtgacagatcagtttgggatgatcggactc
cttacattcatccgggcagctgagacagatcctgggatggttcacctggctttaggaagc
gacctaacaacgctaggactcaacctcaactctccggagaatctgtatcctaagtttgca
tctccctgggcttcagctccttgtcgaccacaagacattgacttccatgttccctcagag
tacttaaccaacattcacataagggacaagctggctgcaataaaactgggacgatacggt
gaagacctgctgttttacctctactacatgaacggaggagacctcttacaactcctcgct
gctgttgagctcttcaaccgggactggaggtaccataaagaggaaagggtttggatcaca
agagcacctggcatggagcccacgctaaagaccaacacctacgagagaggaacatactac
ttctttgattgtcataactggaggaaggtcgcaaaggagtttcacctggaatacgacaag
ctagaagagcggcctcacgtgccaaccaccttcaattacaatccggcccagcaggccttc
tga
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