Puntigrus tetrazona (Sumatra barb): 122330795
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Entry
122330795 CDS
T08985
Symbol
amfra
Name
(RefSeq) autocrine motility factor receptor a
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122330795 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122330795 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122330795 (amfra)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
122330795 (amfra)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122330795 (amfra)
Multi subunit type E3
ERAD complex
122330795 (amfra)
LMBR1L-GP78-UBAC2 complex
122330795 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122330795
NCBI-ProteinID:
XP_043084044
LinkDB
All DBs
Position
25:complement(13145139..13151795)
Genome browser
AA seq
623 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSTVLLAGTILSAYSTVRDSEYSSALTEDSHSTADEEIKLD
QLDNFGSVITSVLLYLITDSLFVWVMVNTACCILMLIAKVIQCIVFGPLRVSEKQHLKDK
FWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMS
SHVRVLALLVSVLTCCGGLAVLCALVGHLHGMHTVAFMAAECLLVTVRTGHVIIRYSIHL
WDLNHEGTWENKSSYIYYTDFVMELAILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIRRHKNYLRVIDNMESRFAVATPDELVANNDDCAICWDSMTTARKLPCGHLFH
NSCLRSWLEQDTSCPTCRMSLNISEGGREREEGQREPLDENMAAGPGTEARQHLNQHNHF
FHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLNAMAHQIQEMFPQVPYHLILQDLQ
LTRSVEVTTDNILEGRIQVPFPTQPVERSPIQVNPAAEDSAGASGGSEVAAPEAEDFEVR
GSRFSKSADERQRMLMQRKEELLQRARRRYLHKKSDEGDVFSAPADDAVPSVEDEDSDSV
TLRRRRLAAAAERRLQRREPLPF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttctggagcgcttcccctggcccagtttgcagacatacacagccctg
agcacagttctgctggccgggaccatattaagtgcctacagcacagtcagggactcggag
tactcctcggcgctgacagaggactctcacagcacagccgatgaggagatcaagctggac
cagctggacaacttcgggagcgtgatcaccagtgtgctgctgtacctcatcacggacagc
ctcttcgtctgggtgatggtgaacacggcgtgctgcatcctcatgttaatagctaaagtg
atccagtgcattgtgttcgggcctctgagagtcagcgagaagcaacatctgaaagataag
ttctggaacttcatcttctacaagttcatcttcatcttcggcgtgctgaacgtgcagcgg
gtggaagaggtggtgctgtggtgtctgtggttctccatgctcatcttccttcatctgatg
gtgcagctctgcaaggaccgctttgaatatctgtcgttttctcccacgaccccgatgagc
agtcacgtgcgagtgctggctctgctggtgtccgttttgacgtgctgcggcggtcttgct
gtgctctgcgctctagtcgggcatcttcacggcatgcacaccgtcgctttcatggcggcc
gagtgtttgctggtgacggtgcgcacgggacacgtcatcatacggtattccattcacttg
tgggacctgaaccatgagggaacctgggagaacaagagctcatatatctactacacagac
ttcgtcatggagttagccatcctctgcctagacctgatgcatcacatccatatgctgctc
tttgggaacatctggttgtccatggccagtctcgtaatcttcatgcagctgcgctatctc
tttcacgaggtgcagagaagaattcgccgccataaaaactacttgcgtgttatcgacaat
atggagtccaggtttgctgtagcgacgcctgacgagctggtggccaataacgatgattgc
gccatctgctgggattcgatgactacggcgcgcaagctgccctgtggccatcttttccac
aactcctgtctccgctcttggctggagcaggacacttcctgtcccacgtgccgcatgtcg
ctgaacatcagtgaaggtggaagggaaagagaggagggccagagggagccactggatgaa
aacatggccgctggaccgggaacagaggcccggcagcacctcaatcagcacaaccacttc
ttccacttcgacgggtcccggatcgccagttggctgccaagtttctctgtggaggtcatg
cataccaccaacatcctgggtatcgcgcaggccaacaactcgcagctcaatgccatggcc
catcagatccaggaaatgttcccgcaggtcccttaccatctgatcctgcaggatttgcag
ctcactcgctccgtggaggtcaccaccgataacatcctggagggcaggatccaggtcccg
ttcccaacgcagccggtggagcgctcgcccatacaagtaaaccctgctgctgaagattcg
gcgggggccagcggcggttcagaggtcgcggcccccgaggcggaagactttgaggtgcgc
gggagccgcttttccaagtccgcagacgagaggcagaggatgctgatgcagaggaaggag
gagcttcttcaaagagctcgcagacgttatctacacaaaaaatccgatgaaggggatgtg
ttttccgctcctgctgatgatgccgtgccctccgtggaggatgaagactcggattcggtg
accttgaggcgcagaaggctggcggccgcagctgagagacgcttgcagaggcgggagcct
ctcccattttga
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