Puntigrus tetrazona (Sumatra barb): 122330810
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Entry
122330810 CDS
T08985
Symbol
irx3b
Name
(RefSeq) iroquois-class homeodomain protein IRX-3b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122330810 (irx3b)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122330810 (irx3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
122330810
NCBI-ProteinID:
XP_043084076
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All DBs
Position
25:complement(13050836..13053752)
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AA seq
414 aa
AA seq
DB search
MSITRVLRTISLNLNVTSVHLGAESGFNSQRGSPRVSTRSSVSKARSVIVFSVARTFGSS
MSLPQLGYKYIRPLYSTERRVGAELSASGSLSSVLSSMYGAPFASAQGYSAFLPYSSDLS
VLNQLGSQYEFKDSPGIQHAGFPHASFYPYGHQYQFGDPSRPKNATRESTSTLKAWLSEH
RKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKTRTDEDGNVYTSD
NEDGDKRDEDEEIDLENIDTENIEDKQDCDYQDDEKSVSKVSDSEEYDDAGAEKRFMSDI
VKDRRDANSDEGEEEDRIKKSPAAQEPSDNAGPPQKPKIWSLAETATAPDSPKKSSWIQR
NCDAQTVRNPLHVQNWTKMAHQMALTSHYLGLKHQSTSNSHMHARHAEQRTPSL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcacgcgagtgttgcgaacaatctcactcaatctgaatgtgacctcagtccac
ctcggagcggagagcggctttaactctcagcgaggctctccgcgagtttccacccgatcc
tcggtgtcaaaggcgagatctgtgatcgttttttccgtcgctcggacctttggcagcagc
atgtctctcccgcagctcggctataagtacatcagaccgctgtactccacggagcggcgc
gtcggcgcggagctcagcgcgtcgggctcgctctccagcgtcctctccagcatgtacgga
gctccgttcgccagcgcgcagggatacagcgcgttcctgccctactccagcgacctctcc
gtgctcaaccagctgggctcccagtacgagtttaaagacagtccagggattcagcatgca
ggctttcctcacgcatccttctacccgtacggacaccagtatcagttcggagatccgtcc
cgacccaagaacgccacccgcgagagcaccagcaccctgaaggcctggctcagcgaacac
cggaaaaacccctaccccaccaaaggagaaaaaatcatgctggccatcatcaccaagatg
accctcactcaggtgtccacctggttcgccaacgcccgcagaagactgaaaaaagagaat
aaaatgacttgggttcccaaaacgagaaccgacgaggacggaaacgtgtacacgagtgac
aacgaggacggagacaagagggacgaggacgaggaaatagacctggagaacatcgacacg
gaaaacatcgaagacaagcaggattgtgattatcaggacgacgaaaaatcggtgtctaaa
gtttcggattctgaggaatatgacgacgcgggggcagagaagagatttatgagcgatatt
gtaaaagacagaagagacgcaaactcggatgagggagaggaggaggaccgaatcaaaaag
agtccggcagcgcaagagccctcggataacgccggtccgcctcagaaaccaaaaatctgg
tctttggctgaaaccgcgacggcgccggacagtcccaaaaagtcctcgtggattcagagg
aactgtgacgctcagacagtcaggaacccccttcacgttcaaaactggaccaaaatggcc
catcagatggctttaaccagccattacctcggacttaaacaccaaagcacctcaaacagt
cacatgcacgcgaggcatgcagagcagaggactcccagcctatga
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