Puntigrus tetrazona (Sumatra barb): 122330934
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Entry
122330934 CDS
T08985
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122330934 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122330934 (fanci)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122330934 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
122330934
NCBI-ProteinID:
XP_043084246
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All DBs
Position
25:4724596..4740288
Genome browser
AA seq
1378 aa
AA seq
DB search
MSNMKVLVDKILSLSNSDGVDELQKHLTLLTDDQLTTMLTNTALKGKDMGILIKAIFKGS
PVSVSHGANRRLLLYKHCIPLCESGDLQTDVASDIIGLLMLETHSLPGHVLATLASLYVD
AIKVGEMNSGRSLELFPTILTALAATETLAYGKGELSGDEYKKQLINSLCSSRWDPQCVI
HLTTMFRDVPLSAEELQFLIEKILRMFLKLDLQEIPPLVYQLLLLSAKGCKKLVLEGIIS
YFKKQDQLQKEEQRNGESDLEVQSIPQDQLRHVEGTVILHIVFAIRLDHELGREFFKNLK
MAHSDPLCPFSIALLLSVARIQRYEEQVFEFLKGAITKNFKDDQIQDSSKFLQELLPQCN
SISNMILDTVKNSVFGWDHVTQGLVQLGFILMDSFGPKAGAFGKVTEATSSTTKTPNQLA
CRLGGQVLLESFKMHEPIRGEILEQVLNRLVTKTASPVTHFIGLLSSTVLSAPMILLESS
SKVTETFDQLSYLPLSTVQGLLKAVQPLLKVSMSMKDALILVLRKAMFSSHLDGRKSAVA
GFLLLLKNFRILGSLSSSQASQAITSSQVQADVHSRYNTAANEAFCLEILSSLRRCLNQQ
ADVRLMLYEGFHDVLRRNSQLASSIIQTLLSQLKRYFEPEQDLLPPLKLESCISAHGDQV
FIQEPLAHLLCCTVHCLLWNQNIRSGGSVSDDDDDEDEEGGVQSELHTILESITKRMIKS
ELEDFELDKCAEFSTSSSVGVKNSIYAVLVMGLNEVLMEYNFITANYNKNHFEDVLELYK
RYHKVSEILKERTGKGRSTSSKTPRSLLSLGFVSTLLTALFRDSTQSHEESLSVLRSSGD
FLRYSVSVSLQKIQQLEETGHTDGPEGQSPDKTFRHLCDITSVLMWRYTNVPSTVEDAGK
KEKGQSVSLLCLEGLLRVFTTMLQRYPTRMSNFLSSLDVSGEGEAEGEGSDLTEQTAFYI
RQFQRALMNQLSGGEEEFNSKEAQLLVSILSVLSRHLNPSSQQFAQMITWTVKICKETNF
EDISLTKGLLSLLFNLHVLYKSPVSLLWEMCQDIHSQLGDIDQDVEVEKQSHFAIISMKT
AASTTLLVLSQVGKVLDEVDWLIAKKKSQISSDRTISGNTQQPLGQQDPIEKAVTIQLGT
LLTALHELVQTALPQGPCTDTLMRELSRTYSILTTLTKYYIQLCATQPGQLPARLEKLVK
LSGSHLTPQCYGFITYVQSGELTAGGPEKLKKKKKDDEAVAAASAKVLRETKAIPNLIFN
IEQYEKFLILLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQEHQQDESQQVCLCLN
LFIQCCRLGFFIFNGVYLFFFRLKILKFQSKIQRKKGGSNEKQLLFLLLHFCFYYPVH
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatatgaaggtcttggtggataaaatcctatcattatcgaacagtgatggtgta
gatgagctacaaaagcatctcactttgctgactgatgatcagctcacaaccatgcttact
aatactgctctgaaagggaaggacatgggcatcctgatcaaagctatatttaaaggttca
ccggtaagtgtttcacatggtgctaaccgcagactgcttttgtacaagcactgtattcca
ctgtgtgaatctggggatcttcagacggacgtggcatccgatatcattgggcttctgatg
ttagagacgcacagtttgcctggtcacgtattagccacgttagcgtctctatatgtggat
gccatcaaagtaggtgagatgaacagtgggagatcgctggaacttttccctacaattctg
acagctcttgctgctacagaaacattggcatatgggaaaggtgagctaagtggagatgaa
tacaagaaacagctgatcaacagtctttgctctagcagatgggatccacagtgtgtaata
caccttacgaccatgttcagggatgttccattatctgctgaggagcttcagtttttgatt
gagaagattttgcggatgtttctgaagttggatctacaagagattccacctctcgtctat
cagctactgctgctgtctgccaagggctgtaagaaattggttctagagggaatcatcagt
tacttcaaaaagcaagaccaacttcagaaagaggagcagagaaatggagaaagtgatttg
gaggtgcagtccataccacaggatcagctgcgccacgtagaaggaaccgtcattcttcat
attgtctttgccattcgtcttgaccatgagcttggcagggaatttttcaaaaaccttaag
atggcccacagtgatccattgtgtcccttcagtattgctctgctgctttctgtggctcgc
attcaacggtacgaagaacaggtatttgagttccttaagggcgccatcactaagaacttc
aaggatgatcagattcaggacagctctaagtttctgcaggaacttttacctcagtgtaac
agcatctctaacatgattttagacaccgtcaaaaacagtgtgtttggctgggatcatgtc
actcaaggtctggtgcaactggggtttatacttatggattcttttgggcctaaagctgga
gcatttggaaaagtcacagaagcaacttcaagcacgactaaaacgccaaaccagctagca
tgtcgacttggtggacaagttctcctggagagcttcaagatgcatgaaccaatcagaggg
gaaattctagaacaagtcttgaaccgcctggtgacaaaaacggcctcacctgtaacccat
ttcattggccttctttccagcactgtgttgtctgctcccatgatcctcttggaatcttcc
tctaaggtcacagaaacatttgatcagctctcttacttgcccctcagcactgttcagggt
ctcctcaaagctgtgcagcctctgctcaaagtgagcatgtctatgaaggatgccctcatc
ctggtcctccggaaggccatgttctccagtcatttagatggcaggaagtcagcagtggca
ggcttcctgttgctactgaagaactttcgtattctggggagtttatcttccagccaggcc
agtcaggccatcacatctagccaggtccaggcggacgtccactcgcgctataacactgct
gctaatgaagccttctgtctggagatcctgagcagtctacgccgctgcctcaaccagcag
gctgacgtccgactcatgctttatgagggtttccacgatgtccttcgacgtaactctcag
ctggcgagttccatcatacagaccctcctgtcacaattgaagcgatactttgaaccagag
caagatcttcttccacctctgaagctggagtcatgcattagcgcacatggagatcaggtc
ttcatccaggagcctctggctcacttgctgtgctgcacggttcactgcctgctatggaac
cagaacatacggtcaggtggcagtgtgagcgatgatgatgatgatgaagatgaggaggga
ggagtccaaagtgaactacacactattttggaaagcataacgaagcgcatgattaaaagc
gaactggaggattttgagttggataagtgtgctgaattttcaacaagttccagtgttgga
gtgaagaacagcatctatgctgtgctggtgatgggactgaatgaggttctcatggagtac
aactttatcactgccaattacaataagaaccattttgaggacgttctggagctgtacaaa
cggtatcataaggtgtcagagatcctaaaggaacggacagggaaaggccgctccacatcc
agcaaaacccctcgcagccttctgtctctaggcttcgtttccacactgctcactgccctt
ttcagagacagcactcagagccacgaggagagtctgtctgtgttgcgttccagcggagac
ttcctgcgctactctgtgagtgtgtcacttcagaaaatccagcagctggaggaaacgggt
cacacagacggcccggagggacagagccctgataaaaccttccgccatctctgtgacatc
accagtgtgctaatgtggcgctacaccaatgtgccgtcgaccgtggaggatgctgggaag
aaggagaaaggccagagtgtgtctttactatgcctggagggactactacgagtcttcacc
accatgctgcagcgatacccgacacgcatgagtaacttcctgtcatctctcgatgtttca
ggggaaggagaagcagaaggtgaagggtctgatctgacagagcaaacggctttctacatt
cgtcaatttcagcgagcactgatgaaccagctcagtgggggagaggaggagttcaacagt
aaagaagctcagttattggtcagcatcctcagcgtactttcacggcatctcaatccttcc
tcccagcagtttgcacaaatgatcacctggactgtgaaaatttgtaaggaaactaacttc
gaggacatctcactcactaagggcttgctgtccctgctgttcaacctgcatgtgctttat
aagagcccagtgtctctgctctgggagatgtgccaggacatacacagccagctgggagac
atcgatcaggatgtagaagtggagaagcagtctcattttgccatcatcagcatgaaaacg
gctgcatctaccacgcttctagtcttgtctcaagttggaaaggtgttggatgaagttgac
tggttgatcgccaaaaagaagagccagataagctcagacagaacaatttcaggaaacacc
cagcagccactgggccagcaggacccgattgagaaggctgtcactattcagttaggcacg
ctgctaacagctctgcacgagctggttcagaccgccctgccccagggaccctgcacagac
acactaatgagagagctcagtcgaacctacagcatcctgacgacacttaccaaatactat
attcagctgtgcgcgacccaacctggccagctacctgcacgtttggagaaactggtgaag
ctgtccgggtctcatctcactcctcagtgttacggtttcatcacgtatgtacagagtgga
gagttgacagcaggaggtccagaaaagttgaagaagaagaaaaaagatgatgaagcggta
gcagcagcttcagccaaagtccttcgtgagactaaagccatcccgaatctcattttcaac
attgaacagtatgagaagttcctcattcttctctccaagaaatccaaggtcaatctgatg
cagtacatgaaactgagcacttccagagacttcagaattaatgctgccacattagacgct
gcactgcaggaacaggaacatcagcaggatgaaagccaacaggtgtgtctctgtttaaac
ttgtttatacagtgctgcaggttggggttcttcatcttcaatggtgtctatttatttttt
tttagactgaagattctcaagttccagagcaaaatccaaagaaaaaaaggaggaagcaat
gaaaaacagcttctattccttcttttgcacttttgtttttactaccctgttcattaa
DBGET
integrated database retrieval system