Puntigrus tetrazona (Sumatra barb): 122330978
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Entry
122330978 CDS
T08985
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptet00535
]
122330978 (cspg4)
04091 Lectins [BR:
ptet04091
]
122330978 (cspg4)
Proteoglycans [BR:
ptet00535
]
Cell surface proteoglycans
Others
122330978 (cspg4)
Lectins [BR:
ptet04091
]
C-Type lectins
Others
122330978 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
PET122
Motif
Other DBs
NCBI-GeneID:
122330978
NCBI-ProteinID:
XP_043084312
LinkDB
All DBs
Position
25:3592035..3639303
Genome browser
AA seq
2303 aa
AA seq
DB search
MSALCPLLSALFLALLYLLQTANGVSYFGDSYCRIDAVQDLSSFRVSLQFKTSRRSGLLL
LAAGHRDYLSLELYNGRLQARIDMGSGEKVLSSTVGLQLSNLLDHHVSLILKDSKLTMAV
DNLYTTFIPLENEDEDLNIDQGVFLGGVRDLEVEYLSTAIPSLRGCMSNVMFESHDFDIL
ASAATVCYDTKNSCSSEFEAGDGESTSFISPESFISFPTWTRPSSGYRSLEMLMKTTIED
ALLLFHPGDQTDFIAIGMSRGFLKGVLDTGTGMYVLDNVNVKVDDDQWHRVKVQIDTKEF
LISVDSQMVSLPLNETEKLDLVGNLYLGGIQRKMKDVFQNYLARVEEEVSTESFIGCLGE
IKVNHKDRSLQDALITKDIHVKCEGEYDEYESTYDEDLELTTTHPVRITYINNNERHCFP
TEDLPEIFRNISRLLDITPLLVPEGGQANIEIVNLNPTFNLKAAGVRESEIIFTLLNDPW
YGLVDINLRQTRVKKFTLLDVVNKKIKYLHDGNDRYEDQIQLEVTVHGTNLPECLSVARK
YLLPVEIIPVNDIPQLSAGDISITANGRTRLSPNLIKISDSDNRCDELKVTVTSDRTAAG
YLENAQQPGFGLREFTCRQLKEGNIYYVHKGGEVPELTLQVSDADSVSHSSTFKLLITQP
QMTVVTNTGLFITQDDSSPIGIQNLAISATPKTGDVVYNVTQPLQFGELQLISDDGVPKR
VTLFHQSDLEQNRLKYVPNPTADLKGTETEFIHFNAQLGQVVLQDNLFMIKIMPALIGIA
TSVPLEVEDGQQKVIKLEQLQAFVTESNTESRSIQYIITKSPVQGVLMMLDKELTDGDTF
TQQDILNGFISYSPRIRRALDFEDQFQFKVLAEDQYSREYTFPIKIKADSDVPVLINERL
VVLDGKENIINKEYLWVQTSTSTDFMYRIVQDPKHGRLFRDSPPGMQRFDGAIRVFSNED
LSLNRLVYKHDGSEANHDQFSFLAFDSRGGNGWQAEGHEVLRGVFNIAIQSRNDYIPQRV
IHKPFNVVRNGQRLLTTDDILFKDDDADFNDTQLVYVRVGILSGNIVSAADPTQPLYRFT
QADLRDGKVLFVHHGADRERFQLQVSDGLHKTTAVLQVQAGDPYLRIANNTMVIMDHGST
KTLNTSLLSAETNMDIRGAAEIIYHVTSLPSNGRIIVSGIESSTFTQEDLTKGVVSYEHS
DQSLSSKDSFAFTVQAKGWSTEGTFRIKIFKKGYLSLPKVVSNLVILAYEGEHSVINKSH
LEVMQKDILPKEMVYSVKDFPRLGHVVKLNNDSDSTASPVLDYIQSFTQQDINLGRIFYV
SASLQGLDHFTVDVSNGFTTIEDLQVQVVIVPRIIPVQVVNLTVREGGSVPLTQEILNIT
HQFYRSMNIEFFMEEAPQHGEIKYLDEEDGLITFTWDDVQQGQVYYFHDSSETTEDSFSL
MAAAFHMNRRSASLNIGVTILPVNDEAPRLQRNTGMELLAGEESEITANMLSSEDHDTPP
EELVYAIEMPSNGIVAFKVSPDDSVDSFTQAQINNGEVLFIHQGSESGGFSFTVTDGEHT
TPLYRFTVKARQLTISMETKGELMVFPGTRQVISGDVLRAITSEDGDEITYSLVKPPRLG
RIIKSNQHGQFEEITRFTQTELDAGAVYYEHQMPAEPFWVLKDSVELALTSPPAIDLHHS
LPVTVSYYAANQNVSSQLWKNKGISVVQGQSKVIDSSVLDASNLLASLPEQKRAGQDIVY
EVRQFPNHGRLTLGGSDLPRDSPRFLQDDVARGNLEYNHDDSGASSDSFSFRVHLNPTGR
TPQIQPGAVVLEEIFLLSIRRRDSNPPELVSLDLLLEALQGSTTVISKKYLNTVDQDSTP
DEVRFTISKNPANGYIIYNNTGDRINQFSQEDINNGRVAFVSDGSLSNGFMEFVVSDGKH
QTDPYTLHIGILAKSLILNKAPEIHVRQGDDETLITEDMLSTSTRGPVEEDVLYKITNVP
KYAAVMVDRQPTSAFTQKQIKEGRVSVRFVKSTSPRDSVAFVARSRAANVSSVLNITVKP
LAKVAQNPLLPRGATVLVDRKLLDATPLANKTRTSPTFSMIQQPQGARFIKSGGQDDGQP
VSSFTQRDLDEGRITLEILNTTGGQSAGGQSQDEARFLLKAHGVPPAECVLPFHVVPYDP
SKVYGATLLKVPSVIVKSDPGQAEPRWRGDGEVASGSTTATPVVSRRNTLWAILIPILVI
LLLMLLAAMLAYYLVRRNKTGKHNVQTVAAKPKNGEVSQETFRKTDPANNIPMSNMDSKG
ADPELIQHCRTTNPALKKNQYWV
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctgtgtccgctcctgtctgccctgttcctggcactactatacctgctccag
actgccaacggagtttcctatttcggggacagctactgtcggatagatgccgttcaggac
ctgtcaagttttcgagtgtcgctccaatttaaaacaagcagacgtagcggcctactccta
ttggcggcaggacacagagattacctctcgctggagctctacaatggcagattacaggct
aggattgacatgggttccggagaaaaggttctctcctccaccgtgggtctccagctcagt
aaccttctggaccatcatgtgtctctcattctgaaagactccaaacttactatggctgtt
gataacctctacaccacattcatcccattggagaatgaagatgaggatctgaacatcgac
cagggcgtttttcttggaggcgtgagggacctggaagtggagtatctgagcacagctatt
ccctctctgcgaggctgcatgagcaacgttatgtttgagtctcatgactttgatattctg
gcttcagcagcaacagtctgctatgacaccaagaacagctgcagcagtgagtttgaggca
ggggacggagagagcacaagctttatcagtccagaatctttcatctctttccctacctgg
accagacctagttcaggttaccgtagtctagagatgctgatgaagacgaccattgaggat
gctctgttgctatttcacccaggagaccagacagatttcattgcaattggaatgtcaaga
ggattcctaaaaggtgtattggatacgggaactggaatgtatgttctagacaatgtgaat
gtcaaagtagatgatgatcagtggcacagagtaaaagttcaaattgacacaaaggagttc
ttgattagtgtggacagtcaaatggtatcactccctcttaatgagacagaaaagctggat
ctagtggggaacctgtacctgggaggcattcaaaggaagatgaaggatgtatttcaaaat
tacttggctcgtgtggaggaggaagtctcaactgagtcctttattggttgtttaggagaa
atcaaggtgaatcacaaggacagaagcctgcaggatgctctgataactaaagacattcat
gtgaaatgtgaaggagaatatgatgaatatgaatcgacttatgatgaagatttggagtta
acaactacacatccagtaagaatcacatacattaacaacaatgaaagacactgtttccct
acagaggacctgccagagattttccgcaatatttccaggctcctggacatcactcctctg
ctggttcctgaaggaggacaggccaacatcgaaattgtaaacctaaacccaacatttaac
ctaaaagctgcaggtgttcgtgaatctgagatcatctttactctgttaaacgatccctgg
tatggactggttgatataaacttaagacagacaagagtaaagaagtttacccttctggat
gttgttaacaagaaaatcaagtatcttcatgatggcaatgataggtatgaagatcagatc
cagctggaagtaactgttcatggaacgaatctcccagagtgcttgagtgttgcacgcaag
tatctgttaccggtggagatcatcccggtcaatgacatccctcagcttagtgcaggtgac
atctcaatcacagctaacggacgcacacgtttgagcccaaacctcataaaaatttcagac
tctgacaatcgttgtgatgaactcaaggtcacagtcacgtcagaccgtactgctgctgga
tatctggaaaatgctcaacaaccaggatttggtctaagagagtttacttgtagacagcta
aaagaaggaaatatctactatgtgcacaaaggaggagaagtgccagaacttaccttacag
gtctcagatgcagattcggtcagccattcaagcacatttaaattacttataacccagcca
cagatgactgtagtcacaaatactggtcttttcatcactcaggatgacagcagccctatt
ggaatacaaaatctggccatttctgcaactccaaaaactggtgacgtcgtatataatgtt
actcagccacttcagtttggagaactgcaattgatctcagatgatggggtaccaaaaaga
gtcacactatttcatcagtctgatctggagcagaaccgactgaaatatgttcctaacccc
acagctgatctcaagggcacagaaacagagtttattcacttcaatgcacagcttggacag
gtcgttctccaagacaacttgtttatgataaagatcatgcctgcccttataggaatagct
acaagtgttcctctagaagttgaagatggccagcaaaaagtcattaaacttgaacaacta
caagcttttgtgacggaaagcaatactgaatcaagatcaatccagtacataattacaaaa
agcccagtccagggagtcttgatgatgcttgataaagagttgactgatggtgacaccttc
acccaacaagacattttgaacggtttcatcagttacagtcctcgcatccgcagagcacta
gactttgaggatcaatttcagttcaaagtattagcagaggatcagtactccagagagtac
acttttccaatcaaaatcaaggctgattctgatgttcctgtcctcatcaacgagagactt
gttgtgctggacggaaaggaaaacattataaataaagaatacctctgggttcaaacctcc
acctcaacagactttatgtacaggatagtacaagatcccaaacatggtcgtcttttcaga
gactccccacctggaatgcaaaggtttgatggagcaattcgagtctttagcaacgaggat
ctctctttgaataggttggtctacaaacatgatggatcagaggcaaatcatgatcaattt
tcctttctggcatttgattcaagaggtggcaatggttggcaagcagagggtcatgaggta
ctaaggggtgtgtttaacattgcaatacaatccaggaatgactacatacctcaaagggta
atccacaaaccttttaatgttgtcagaaatggccagcgtttattgaccactgatgacatt
ttgttcaaagacgatgacgctgactttaatgacacccagctggtttacgtgagagtggga
atactttccggaaacattgtctccgcagcagacccaacgcaacctctctaccgctttacc
caggccgacctgagggacggaaaggttttgtttgtccatcatggggcagatcgtgagcga
ttccaacttcaagtatctgatggtttacataagacaacagctgtacttcaggtgcaagca
ggtgacccttacctacgtatagccaacaataccatggtgatcatggaccatggtagcacc
aagacactgaacaccagtctgctaagtgcagagaccaacatggacattagaggtgcagct
gagataatttatcatgtgacttctcttcccagtaatggtaggattatagtcagtggaatt
gaatcgtccacatttacacaagaggacctaactaagggtgtggtgtcctacgaacacagt
gaccagagccttagctccaaagattcctttgccttcaccgtgcaagctaagggttggtcc
acggagggtacttttaggataaagatattcaagaaaggatacctatcactgccgaaggtt
gtgtcaaacctggtgatacttgcctacgaaggagagcattctgttattaataaaagccac
ctggaggtgatgcaaaaagacatcctgcccaaagagatggtgtactccgtcaaagacttt
ccacggctgggacatgtggtcaaactcaataacgactcggacagcacggcatcacccgtg
ctggactacattcaatccttcacacaacaggacataaacctgggcagaatcttttacgtc
tctgcttctcttcagggcctggaccacttcaccgtcgatgtcagcaatggcttcaccacc
atagaagatctacaggtgcaagtggtcattgtgccacgcatcatacccgtccaggtggtc
aacctcactgtgagggaaggtggatctgtgccactgacccaagagattctgaatatcaca
caccaattctaccgttccatgaacatcgagttttttatggaggaggcacctcagcatgga
gaaattaagtatctggatgaagaagatggacttatcacattcacctgggatgatgtacaa
cagggacaggtgtactacttccacgacagcagcgagaccacagaggacagtttcagcctc
atggcggccgcttttcacatgaaccgccgaagtgcgtccttgaacatcggcgtcaccatc
ctcccggtgaacgacgaggctccccgcctccagcgcaacaccggaatggagcttctagcc
ggcgaggagtctgaaatcacagctaatatgctgagcagcgaagatcatgacacccctccg
gaggagctggtgtatgctatcgagatgcccagcaatgggatcgttgcctttaaagtgtcc
ccggatgacagcgtggacagtttcacccaggctcagattaataatggagaagttttattc
attcatcagggttcagagtctggtgggttcagtttcaccgtgactgatggagaacacact
acacctctctaccgcttcactgtcaaggcaagacagcttaccatctccatggaaacaaag
ggagaactcatggtcttcccaggcaccaggcaggtgatcagtggagatgttttgcgggcc
ataacaagtgaagacggtgatgaaatcacatactcactagtgaaacctcctcgcttggga
cgaataatcaaatctaaccagcatggacagtttgaggagattactagattcacacagact
gagttggatgcaggtgccgtatattatgagcatcagatgccggctgagcccttctgggtc
ctgaaagactctgttgagctggcccttacatcgcctcctgcaatagatctgcatcacagc
ctgccagtcaccgtgtcatactacgcagccaatcaaaacgtgtcatctcagctctggaag
aacaaaggtatatctgtggtgcagggtcagtctaaagtgattgacagctctgttttggat
gcttctaacctgctggccagtttgcctgagcagaagcgggcagggcaagatattgtctat
gaagtgcgacagttccccaatcatggacgactcactctcggagggtctgacctgcctcgc
gattctccccgtttcctgcaggatgacgtggcacgtggtaatcttgagtacaatcacgat
gactccggagcatcttctgatagtttctctttccgagtccatctgaaccccactggccgc
actccgcaaatccagcctggtgccgtggttttggaggagatctttctgctctccatcaga
cggcgagactcaaacccaccagaacttgtaagcttggacctgctcctggaagcactgcag
gggtccacaaccgttatctccaaaaaatacctcaacacagttgaccaggacagcacaccg
gatgaagtccgatttaccatctccaagaatccagctaacggatatataatctacaacaac
accggagaccggatcaaccagttcagccaagaagacattaataatgggcgggttgctttt
gtcagcgatggaagtctttccaatggtttcatggaatttgtagtgtctgacgggaaacac
cagacagacccatacacgctgcatattggaatcctggctaagtctctgatactgaacaaa
gctccagagatccacgtaaggcaaggagatgatgagacgctaatcacagaggacatgctg
agcacctccactaggggtcccgtggaggaagatgtactctataagatcaccaatgtccca
aaatatgcagctgtaatggttgacagacagcccacatcggctttcacacagaagcagatc
aaagagggaagagtgagtgtccgtttcgttaagtccacctcaccaagagatagcgtggcc
tttgtggcccgaagcagggcagcgaatgtgtcctctgtcctcaacattacagtgaaacca
ttggcaaaggtggcccagaatcccctgctccccagaggtgctacagtactcgtagacaga
aagctgctggatgctacacctctggccaataagaccagaacatctccaaccttcagcatg
atccaacaacctcaaggagctcggttcatcaagagtggtggacaagatgatggccaacca
gtgagttctttcacccaacgagacctggatgaaggtcggataactctggagatcttaaac
acaactgggggtcagagcgccggaggtcaaagtcaagatgaagcacgcttcctcctaaaa
gcacacggcgtacctcctgcagagtgtgtcttgcccttccatgtggtcccatatgaccct
tctaaagtttatggtgctacgctgctcaaagtgccatcggtgattgtcaagagcgatcca
ggacaagctgagcccaggtggagaggagatggtgaagtggcttctggcagcactacagcg
actcctgtggtgtctagaagaaatacactgtgggctatccttattcccatcctcgtcatc
ctcctcctcatgctcctcgctgcaatgctggcctactatttggtccgtcgcaacaagacc
gggaaacacaatgtccaaacggtggcagcaaagccgaagaatggagaagtgagtcaggag
acttttaggaaaaccgatcctgcgaacaacatccccatgtcaaacatggactccaaaggc
gcagatcctgagttaatacagcactgtcggacaacaaacccagcactgaaaaaaaaccag
tactgggtttga
DBGET
integrated database retrieval system
