Puntigrus tetrazona (Sumatra barb): 122330983
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Entry
122330983 CDS
T08985
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122330983 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122330983 (sin3aa)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122330983 (sin3aa)
REST complex
122330983 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122330983 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
DUF6706
Motif
Other DBs
NCBI-GeneID:
122330983
NCBI-ProteinID:
XP_043084315
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All DBs
Position
25:3684787..3701778
Genome browser
AA seq
1323 aa
AA seq
DB search
MRSRRPMGGEGGVPNYLFQTRIRSARLFFAGLSFRLEYEYSMRRRLEDQESVFTPQQRRL
PGSAEGFQHRVLAPAPAVFEAVADGMQPTPGIQYPVPQAYQVSTVAQSSSGHSHTPSPAA
AHSGAHHHGPAAVQAHGPAPVQGHSHPPTPSPSAQGQQQFQRLKVEDALSYLDQVKLQFG
SQPHVYNDFLDIMKEFKSQCIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTND
LVNVTTPGQIHHITPHGISVQNIPTRPPPPPPPPPQPPQLQNQIPTNPPSLASTPPAQPT
PKTKPLQSPALTPSSHPNPSIPPYASPRSPPLQPHTPVNSMPTAPPLQNNQPVEFNHAIS
YVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPALTEQEVYAEVAQLFKNQ
EDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKPQLNNKQRPNQNGCQIRKH
STTAVTPPVKKKLKLMNIKDSSVAESGKHGGGTESLFFEKVRKALRSSEAYDNFLRCLII
FNEEIISRAELVQLVVPFLGKFPELFTWFKNFLGYKEMSHVERYPKERATEGIAMDIDYA
SCKRLGSSYRALPKSYQLPKCTGRTAVCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHM
YRCEDERFELDVVLETILATIRVLEAVQKKLSRMSAEDQAKFRLDNTLGGCSEIIHRKAI
QRIYGDKALDIIDGLKKNPAVSVPIVLKRLKLKEEEWREAQRGFNQIWREQNEKYYLKSL
DHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQASEDSSASPSGPHLTLTYEDRQILED
AAALIIHHVKRQSSINKEDKYKIKQIIYHFIPDMLFSQRGVLSDAEEDEDEEDMDHDEGA
SKKHNGLAGGVSGSPTKSKLLFSASAAQRLRSCEDAYNLFYVNNNWYIFLRLHHTLCSRL
LRLYTQAERQIEEDLKEREWEREVLGLKRDKNDNTAVQLRLKEPMDIDVEDYYSAFLEMV
RNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQNIVRQLQHIVSEEICVQVTELYLS
ESSHSATGGSLLTQSSRAPTEASYQRKAEQLMSDENCFKLMFMKNQGNVQLTVELLDTEE
ESSDGPMEIERWSDYVVRYLSADFSSPDLRDHLSQKPVFLPRNLRRIRKCQRGRDSQEKE
VKDGGRKENADSMKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVSTRLHHRF
QAWTQRWVKEHVTRDMAAETNRWLTGEGREGLVPCSTTCHPETLHFRRINKFRVQYDSAH
KSP
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcacgtagaccaatgggaggagaggggggcgttcccaactatttgttccaaaca
cgaatccggagtgcgaggctctttttcgcaggtcttagttttcgtcttgagtatgagtac
agcatgaggaggcgtttagaggatcaggagtcagtgttcaccccacaacagcgccggctt
cccggcagcgctgagggcttccagcacagagttcttgccccagcgcctgccgtattcgag
gctgtggctgacggcatgcagcctactccaggaatacagtacccggttccccaggcatac
caggtgtccacagtggcccagagctcaagtggtcacagtcacacacccagtcctgccgcg
gctcacagtggcgctcaccatcatggtccggcggcggtccaggcccacggtccagcgccg
gtgcagggccacagtcacccacccaccccctccccatccgcacaggggcagcagcagttc
cagagactcaaggtggaggacgccctgtcttacctggaccaggtgaagctacagtttggc
agtcaaccacatgtctacaacgatttcttggatatcatgaaagagtttaagtctcagtgt
attgacaccccgggcgtaatcagcagggtgtcgcagctctttaagggtcaccccgatctc
attatggggtttaacacgtttcttccgccgggatacaagattgaagttcagaccaatgac
ctggttaacgtgacgacacccggtcagatccaccacatcacacctcacggcatctccgtg
cagaacatccccaccagaccacctcctccgcctccgccgccgcctcagccgcctcagctg
cagaaccagatccccacaaaccctcccagcctggcctccacacctcccgcccaacccacg
ccgaaaaccaagccgctgcagtctccagctctcactcccagcagtcatcccaatccgtcc
atccctccctacgcgtcccctcgctcgcccccgctgcagccccacaccccggtcaacagc
atgccgaccgctccgccgctgcagaacaaccaacccgtggagttcaaccacgccatcagc
tacgtcaacaagattaagaaccgcttccagggccagcccaacatctacaaatccttcctc
gagatcctgcacaagtaccagaaggagcagcgtaatgctaaagaagcgggcgggagttac
accccagccctgactgagcaggaagtttacgctgaggtggcccaacttttcaaaaaccag
gaagatctgctctcggagttcggacagtttctaccagacgccaacagctctgtgctgctg
agcaagacgacagcggagaaggcagagtctgtgcgtaatgatcatgggggaacggctaag
aaaccacagctcaataacaagcagaggcccaatcagaacggctgccagatacgcaagcac
tcaacgacagccgtcaccccgcccgtgaagaaaaagctcaagttaatgaatatcaaagat
tcatccgtggcagagtctggcaaacacggtggagggacagagtctctattctttgaaaaa
gtgcggaaggctttacgaagctctgaagcatatgacaactttctccggtgcctgatcatt
tttaacgaagagataatttctcgtgctgagctggttcaacttgtggttccattcttgggc
aaatttcctgagctgttcacttggtttaagaacttccttggatacaaggagatgtcccac
gtggagaggtaccccaaagaaagagccacagaaggcattgccatggatatcgactacgct
tcatgtaagcgtcttggctctagttatcgagctttaccgaagagctaccagcttcccaaa
tgcacaggaagaacagcggtctgtaaagaggtgctgaacgatacgtgggtttccttcccc
tcctggtctgaggactcgaccttcgtcagctccaagaagactcagtacgaagagcacatg
tacaggtgcgaggacgagcgattcgagctggacgtcgttttggaaaccatcctcgctacc
attcgcgtgctggaggcggttcagaagaagctgtcccgaatgtctgcggaagatcaggcc
aaattcaggctggacaacactctgggcggctgctcggagatcatccacaggaaagccatc
cagaggatatatggagacaaagctctggacatcatcgacggactgaagaagaatccggct
gtgtctgttcccattgtactgaagagactgaagctgaaggaggaagagtggcgcgaagct
caaaggggttttaaccagatctggcgagagcagaacgagaaatactacctaaaatctctg
gaccatcaaggcattaacttcaaacagaacgacactaaggtgctacgctcgaaaacactt
ctcaacgagatcgagagcatctttgacgagcggcaggaacaggcttcggaggacagcagc
gcgtctccgagcgggcctcacctgacgctgacttatgaggaccgtcagattctggaggac
gcggcggcgctaatcatccatcacgtcaaacgccagagcagcatcaacaaagaggacaaa
tacaagattaaacagatcatctaccacttcatccccgacatgctgttctcccagagagga
gtgctgtcggacgctgaggaagacgaggatgaggaagacatggaccacgacgagggggcg
tccaagaagcacaacgggctagcgggaggcgttagcggcagcccgacaaagtccaaactg
ctttttagcgcgtctgcggctcagcggctgcgctcctgcgaagacgcgtataatctgttt
tacgtcaataacaactggtacatcttcctgcggctgcatcacaccctgtgttcgcgtctg
ctgcggctttatacgcaggccgagagacagatcgaagaggacctgaaggagcgcgagtgg
gagagggaggtgctcgggctcaagcgcgacaaaaacgacaacactgccgtccagctgcgt
ctgaaagagcccatggatatagatgtggaggattattactcggcgtttctggagatggtg
cgtaatctgctggatgggaatatggaggcgtctcagtacgaggattcgctccgagagatg
ttcaccattcacgcctacatagccttcaccatggacaagctcatccagaacatcgtcaga
cagctccagcacatagtgagcgaggagatctgtgttcaggtcactgaactgtacctgagt
gagagcagccactcggccacaggtggatctctgctcacacagagcagcagggccccgaca
gaggcgtcttaccagcgcaaagctgagcagctcatgtccgatgagaactgctttaagctg
atgttcatgaagaaccaagggaacgttcagctcactgtggagctcctggacacagaagag
gagagctcagacggcccaatggagatcgagcgctggtcagattacgttgtgaggtatctg
tcggctgatttctcatctccagacctgagggatcatctgtctcaaaagcctgtgtttctg
ccaaggaacctgcggcggatccgtaaatgtcagcgcggccgtgactctcaggagaaggag
gtgaaggacggaggcaggaaggagaacgcggacagcatgaagatggagtgcatgttcaaa
ctcaactcttataagatggtgtacgtctttaagtctgaagactacatgtacagacgcacc
gctctgctgagagcccaccagtctcacgagcgagtgagcacacgtctacaccaccgcttt
caggcctggactcagcgctgggtgaaagagcacgtgaccagagacatggccgccgaaacc
aaccggtggcttacgggagaaggccgggagggactggtaccctgctccaccacctgtcac
cccgagacccttcacttccggcgcattaacaagttcagagtccagtacgactccgcgcac
aagagcccgtga
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