Puntigrus tetrazona (Sumatra barb): 122331057
Help
Entry
122331057 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122331057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122331057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
ATG17_like
DUF7652
Lipase_GDSL
BNR_6
Motif
Other DBs
NCBI-GeneID:
122331057
NCBI-ProteinID:
XP_043084433
LinkDB
All DBs
Position
25:complement(16536933..16565638)
Genome browser
AA seq
1785 aa
AA seq
DB search
MLLQLAALLILGALALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGLHKPEPF
CIVSHLQEEKKCFVCDSRGTYDESTHQVTSHRIENVVTTLAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWQVYRYFAYDCESSFPFVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPAFRIHDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPIDGAGEVVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDSCHFDMAVYRASGNVSGGVCD
DCRHNTMGHKCEQCKPFFYQHPEKDIRDPNICESCNCDPVGSLNGGVCDPLTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNALGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNHCSPESGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAFLEFNIDNI
PYSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
VLSRPVCFEEGFNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDLFSGSGSEGGD
MVTNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSAFLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRLNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSVHSFCHEATGQCECIP
GAYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDPLTGQCLSCRDHTTGHNCERCLNGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGTCYKSLDSNQVFCVCNQGYKGARCEECAPGYYG
NPHEVGGECRPCQCNNNIDMTDPESCDARTGACLKCLYHSEGESCDRCKIGYYGNALTQS
CRKCVCNHMGTVEEACTSPGNCSCELSSGQCQCLPQVVGQRCDQCAPDTWNMASGNGCEA
CDCDLKHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKVTGHCVCVESVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQATINNVESSANSIRNILAQNPATQPLTEIQGLLEQATALMSEMNTN
LNLTEETLSEISSDSNSTGTKLKSLKEEAQKLEQTVKDLQEQVEFVKNSDIRGARASVTR
YYEQSQMAEIRANASIIDPDNLVNQSATLRTETEDLMNQTKEEFIQRHDEFEKKLDNLAG
QLETLDLSELSKKTCGSPAGSENCADSPAGGLSCVDGEGKRKCGGEGCDGLTTLAHNAWQ
KAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKFNAQEVLAKTNETKKRVDGSNEELRQ
LIRQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRDRVSSLTDVEDILN
QSAADILRAESLLEQARKARKEAMDVKDTAEMVKEALQQAERARVXVTEALKQASADIKG
TQDLLISVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANSTEKEADSIKAL
AEQLKKDLDSELKDKYSSVEELITQKAERSAEAKKRAEKLQQEAKTLLLQASDKLQLLKN
LEKNYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagcccttttaattttaggggcattggctctcgcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcctgccacgggagatcttctcatt
gggagagcacaccagctctcagccacttccacatgtggactccacaagcccgagcccttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtgtgcgactccaggggaacc
tacgatgaaagcacgcaccaagtaaccagccacagaatcgaaaatgtcgtgactacgtta
gccccaaaccgcctcaagacttggtggcagtcagaaaatggcctggagaacgtcacaatc
cagctgaacctggaggcagagttccacttcacccacctcatcatgacctttaaaacgttc
agacctgctgctatggtgatcgaacggtcgtcagactttgggaagacttggcaggtgtac
cgttacttcgcctatgactgcgagtcctccttccccttcgtctctcaaggacccatgacc
aaagtggacgatgttatctgcgattcccgctactccgacatcgaaccctcaactgagggc
gaggccatctttagggttttggatccagctttcaggattcatgatccctacagccccaga
attcaaaacatgctaaagatcactaatctcagggtgaagttcactaagctgcatactctc
ggggacaatcttctggactcgcgtatagagatcaaggagaagtactactatgcgatttac
gacatggtggtgagaggaaactgtttttgctatggtcacgcatctgaatgtgcccccatc
gatggagctggagaggtcgtggatggcatggtccatggccattgtatgtgtaatcataac
accatggggctgaactgtgagcgctgccaggacttttaccacgacctgccctggagaccc
gcggaaggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactcagactcc
tgtcattttgacatggccgtgtatcgggcctcgggtaacgtgagcggcggcgtgtgcgac
gactgcagacacaacaccatgggtcacaagtgtgagcagtgcaagcccttcttctaccag
catccggagaaagacatccgtgaccccaacatctgcgagtcctgtaactgtgatccggtc
ggctctctcaacggtggagtgtgtgatcctctgacagacgtgtctctcgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggcgagcgctgtgaccagtgcaaacagggc
cattacggactcagcgacgaccctctgggatgccagccgtgcacatgcaatgctttgggg
acggttccaggtggaagtccctgcgatacagactcaggaaactgttactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaataaccactgctctcct
gaatcgggtcagtgtcagtgtcgcgagcacatgtttggcagacgctgtgaccaggtggag
tctggtttttacttcatcgctctggaccactacacttatgaagccgaggacgccaagttt
ggacctggtgtgactgtcgtcccaagaccccagcctcaggacagatctcctacgtggact
ggcattggttttgtgaacgttcctgaaggcgcctttctcgagttcaacatcgacaacatc
ccctactctatggagtacgacattatcatccgatatgagcctcagctgccggagcagtgg
gaggaggtgttgatgactgtcatcaggcctcgagtcattaccgccgacagccgctgtgcc
aacacaatgcctgacgatgacaaccaggtggtgtctctgcatcctggatccaggtatgtg
gtgctgtctaggcctgtgtgtttcgaagagggcttcaactacaccgtgcgcttgagtctg
tctcgctactcggctctcagcgatgtgcagtcgccgtacacgctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatcttttctctggctctgggtcagagggtggagac
atggtgaccaacagcgcctgggaaacgttccagcgctaccgctgtttggagaacagccaa
gcagtggtgaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcggct
tttctccaccagggagttaaagcctgtcagtgtgacccgcagggctctctcagcacggtg
tgcgacccgagcggcggccagtgccagtgccgtctcaacgttgttggcaggaactgcgat
aaatgcgccccggcgaccttcctctttgggccgcaaggctgcagaccatgtgactgcagt
cctgaggggtccgtccactccttctgccacgaggccaccggtcagtgcgagtgtattccc
ggggcgtacgggcggcagtgtgaccgctgtctgccgggacactggggattcccaaactgt
cgcccctgcacctgtaatggccacgcggagcagtgtgacccgctcacgggacagtgtctg
tcctgccgggaccacaccactggacacaactgcgagaggtgtttgaatggctattacggt
gaccccgtcctgggctctggagaccactgccgcccctgcatgtgtccggacggtccgggc
agcggcagacagttctccggcacgtgttataaaagcctcgactccaaccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccacacgaggtgggcggagaatgccggccctgtcagtgcaacaacaacatcgacatg
acggacccggagtcctgcgatgctcgaacgggcgcttgtctcaaatgcctttaccacagc
gagggtgaaagctgtgaccgctgcaagatcggctattacggcaacgcactgacccagagc
tgcaggaagtgtgtgtgtaatcacatgggcacggttgaggaggcgtgcacctctccgggt
aactgcagctgtgagctgagcagcggtcagtgtcagtgtcttcctcaagttgtgggtcag
cgttgcgatcagtgcgctccggacacctggaacatggccagcgggaacggctgcgaggcc
tgcgactgcgacctcaaacactccttcggctcgtcctgcaacgagatcatgggccagtgc
tcttgtaaacccgggtttggaggcagaacctgtcgagagtgtcgagagctgttctgggga
aaccctgaggtcaaatgtcacgcatgtgattgtgacccaagaggcatcgcggagcagcag
tgcaacaaggtcacaggtcactgcgtttgcgtggaaagtgtttccgggcctcgatgtgac
acgtgtgctcgaggctacaccggtgagttcccacactgcgagcgctgccaccagtgcttc
gctgaatgggatgtgattgtgggcgacctcaccaaccagacccacagactggtccagaag
gtcaataccatcaaagccactggcattaccggaccctaccaagctaccatcaataacgtt
gaaagcagtgccaactcaatccgcaacatcctggcccaaaatccagccactcagccccta
acggagatccaaggacttctcgaacaagctactgccttgatgtctgaaatgaacaccaac
cttaacctgacggaggagaccttgtccgagatatcatccgacagcaacagcacaggcacc
aaactgaagtccctcaaagaagaagctcagaaactggaacagacggtgaaggaccttcag
gagcaggtggagtttgtgaagaactcagacattcgaggggccagagccagtgtgactcga
tactatgagcagtcccagatggcggagatccgtgcaaatgcctccatcattgatccagac
aacctggtcaatcagtctgccaccctgaggacagaaacagaagacttaatgaaccagacc
aaagaagagttcatccaacgacacgatgagtttgagaagaaactggacaaccttgctgga
cagctggagactctggacctgtctgagcttagcaagaagacatgtggcagtccagctggc
tcagagaactgtgccgactctcctgcgggaggcctgagctgtgtggatggggaaggaaag
aggaagtgtggaggagagggatgtgacggcctcaccacactcgctcacaacgcctggcag
aaagccaaggactttgacctggagatcatcagcgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaggtaaaagcagatgaagcaaagtttaatgctcaagaagtg
ctggcaaaaaccaacgagaccaaaaagcgtgtggatggaagcaatgaggagctacggcaa
ctcatcagacagattcgagactttctcactcaagatggggcggacctggaaagcatcgag
gctgtggccaatgaggttctgcaaatgcagatgcccaccactccagcccagctgcagaac
ctgaccgcagagatcagggaccgcgtgagcagcttgacagacgtcgaggacatcctcaac
cagagcgctgctgacattctgagagcagaaagcctgctggaacaagcccgcaaggccaga
aaggaggcgatggatgtgaaagacactgctgagatggtgaaggaggccttgcagcaggct
gagcgcgccagagttncagtgaccgaggctctgaaacaggccagcgctgacatcaaggga
acgcaagacctgctgatctccgtggagtcggagacgtcggactcggagctaaaactgagt
aacgccacccgaaggctgctgaagttggaaagcgatgtagctttgctgaaagaaaaggca
ctcaacacctccaccagcgccaacagcacagagaaagaggcggacagcatcaaggcactt
gctgagcagctcaaaaaggatctggattcagagttgaaggacaagtacagtagtgttgag
gagctaatcacacagaaagcagaaaggagtgcagaggccaagaaaagagcagaaaaactc
caacaggaagccaaaactctgctgctacaggccagtgacaaactccagctgctaaaaaat
cttgagaaaaactatgatgaaaatcagaagctgctggaggacaaggccaatgaactggtg
gatctggagaaggctgtgaaagaactgcttcaggagatcagtcacaaagtcaccgtctac
agcacctgtctgttttaa
DBGET
integrated database retrieval system
