Puntigrus tetrazona (Sumatra barb): 122331271
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Entry
122331271 CDS
T08985
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04110
Cell cycle
ptet04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122331271 (smc1b)
04114 Oocyte meiosis
122331271 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122331271 (smc1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122331271 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
122331271 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
AAA_13
Urm1
Motif
Other DBs
NCBI-GeneID:
122331271
NCBI-ProteinID:
XP_043084772
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Position
25:complement(8062929..8072870)
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AA seq
1232 aa
AA seq
DB search
MGFLKQLDVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAVNLRVKH
TRELIHGAHIGRPSSTFASVSMIYCGDNNEEMIFSRRISGESSEYRVNGKQLTLAKYTGE
LEKIGVVVKAKNCLVYQGAVESIAMMNAKERTKMFERISSSGELNTEYDAKLAALQKAKE
DTQFHFNRKKAATAEKKQVFKDKTEAEKYQALVDEHRENKLQLTLFQLFHNEKRIDAQSE
SLRDVQDASARQKNSLDAYELTVKAQKREHGRLNRELQQLEKEIRSQEQILNQQRPKYIK
AKVNTSHREQKVEEARRSLQKNQSQQAKKEQELQELKSELTELERAWRASESQMEEEAAQ
RGAKVQLEESQMEQYKELKELARKKGAVLNQSAEKLHWEVKADSEKLQFDLRRKSEIRAN
IKHSQTRMEDFSRRAEKLEEFVNATRKVLEEQRHQEEQLAEELASGLVRMEEVNEELAQV
LTKLQNARLDSHENRRQQRRDEVLESLRRLYPDTVYGRLVDLCQPIHKKYQVAVTKVFGK
NMNAIVVTSAKVAHDCIRFLKEERAEPETFLPIDYIDVRPLNERLREVQAAKLVVDVVQC
AQNAPQLKRVIQYVCGNSLVCENLKDARHIAFDGPERLQTVALDGTLFRKSGVISGGTLD
LRCKARRWEEKDMNKLKEEKDQLSSELRALIKLKRKEVDLTQIRAQSQGNQTRLKYSNSE
LDSIRKKSIPACQAEISKLRSELSNLEAQIEIQTESVELKDNEMKAIRDKIHQLEDVVFA
DFCAEIGVANIREYEQDYLRMQQEIEKKRLEFESQHTRLSTQIEYEQAQMEKLIKQMKTE
TIEKEESLVISLKKVEDRLLIAVEETQSNLIALNNQLSEKTILVKEAKMELDKTLKGLQE
NSKVLVKLQKETICAEASLEQLRLSKHNLLLACKIDGLPLTLISGALDDISDIKLDSESQ
SISTLDIYEREAQMVFDYSTLDSGLKTLGEESEVEAELEKLKDGISSLESMIMMSRAPNL
KALEKIREVKDSFREVMDAFETSTHTTKKCSQEFEQVKSKRFNLFSQCFEHVSVIIDQIY
KKLCRNSSAQAILSAENPNEPYLDGINYNCVAPGKRFMAMDNLSGGEKAIAALALVFAIH
SFRPAPFFVLDEVDAALDNTNIGKVTGFFRMMSRESCQIIVISLKEEFYSRADALLGVYS
MFDDCMFSRLLTLDLTPYPLNDENATDREKNK
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttaaagcagttagacgttgaaaatttcaagtcctggcgaggaaaacaaact
attggcccatttaaaaggtttaattgcataattggcactaatggatcaggcaaatctaac
gtcatggatgctcttggatttgtgatgggagagagagcagtaaatcttcgtgtcaagcac
accagagaactcatccacggtgcccacatcggcagaccctcatccaccttcgccagcgtc
agcatgatatactgtggagacaataatgaagaaatgatcttcagcaggcgcatttcaggg
gaatcttctgagtatcgtgtgaatggtaaacagctcactttggcgaagtacactggagag
ctggagaagattggcgttgtagtgaaagctaagaattgtctggtgtatcagggtgctgtg
gagtcaattgccatgatgaatgccaaagaacgaacaaagatgtttgaacgaatcagcagc
tctggagagctgaacaccgagtatgatgccaagctggcggccctgcagaaagccaaagag
gacacccagttccactttaacaggaagaaagcagctacagctgagaagaaacaagtcttc
aaagataagactgaggcggaaaaatatcaggcactggtggatgaacacagagaaaacaaa
ctccagctgaccctctttcagcttttccacaacgagaaaaggatagacgcacagtcagaa
tcactgagggacgtgcaggatgcctcagcgcggcagaagaacagcctggacgcctacgaa
ctaacggtgaaggctcagaagagagaacatgggcgtctgaatcgagaacttcagcagttg
gagaaagagatcagatctcaggaacagattctcaatcagcagaggcctaagtacatcaaa
gctaaagtgaacacctcccaccgtgagcaaaaagtggaggaggcgcgcagatcgcttcag
aagaatcaaagtcagcaagccaaaaaggagcaggagctgcaggagctgaagagtgagctg
actgagctggagagggcttggagggcctctgaaagtcagatggaggaagaggcggctcaa
agaggagctaaagtgcagctagaggagagccagatggaacagtataaggaactcaaagag
ctggcaaggaaaaagggagctgtactaaatcaaagtgcagagaagcttcactgggaggta
aaagcggactctgagaagctccagtttgacttgaggaggaaaagtgagatacgggcaaat
attaaacactcacagactcggatggaagatttcagcagaagggcagagaagctggaggag
tttgtcaatgctactagaaaagttcttgaggagcagcgacatcaggaggagcaactggca
gaggagctggcgagtggtctggtgcgaatggaggaggtgaatgaggagctcgcccaagtg
ctgacgaagctgcagaacgctcgtctggacagccatgagaaccgacgacagcagaggcgt
gatgaggtcctggaaagcctcaggagactttatcctgatacagtgtacggccgtctagtg
gatttgtgccagcccatccacaagaaataccaggtcgctgtcaccaaggtgtttggcaag
aatatgaacgctattgttgtcacatctgcgaaagtagctcatgactgcatccggtttctg
aaagaagaaagagccgaaccggagacattccttccaattgactacatagatgtgcggcct
ctgaacgagcgtctgagggaagtgcaggcagccaagttagtggtggatgtggttcagtgc
gctcaaaatgcccctcagcttaagagggtgatccagtatgtgtgtgggaactccttggtt
tgtgagaatctgaaagatgcccgtcacattgcttttgacggccctgagcgccttcagaca
gtggctcttgatggcaccttgttccgcaagtctggggtgatttcagggggaactttggac
ttgcgctgtaaagctcgacgctgggaggagaaagatatgaacaaactaaaggaagagaaa
gatcagctgtcatctgaattgcgtgccctgataaagctgaagcgcaaggaagtggattta
acgcagatcagggctcagtctcagggaaaccagactcgactcaaatactccaactcagaa
ctggactccatacgcaagaagagcatcccagcttgtcaggctgagatttccaaactcaga
agtgagctgtccaacctcgaggcccagattgagatacagactgagagtgtagaactgaag
gataatgagatgaaggccatcagagacaaaattcatcagttggaggatgttgtgtttgcg
gatttctgcgcagagatcggtgtggctaacatccgtgagtatgagcaggattatctccga
atgcagcaggaaatcgagaaaaaacgcctagagtttgagtcccagcatacccgtctgagt
acccagatagagtatgaacaggctcagatggagaaacttatcaaacagatgaagacagag
accatagaaaaagaggagagccttgttatcagcttgaaaaaggtggaagacagacttttg
atagctgtggaggagacgcaatcaaatctgatcgccttgaacaaccagctgtcagaaaag
acaattttagttaaagaggccaagatggagcttgacaagactcttaaaggcctccaggag
aattccaaggtgttggtgaagcttcagaaggaaacgatctgtgcagaggcgtctctggag
caactaagactgagcaaacacaacctgctgctggcctgtaagatagacggcctcccgttg
acactgatctctggagctctagatgacatcagtgacataaagctggactcagagtctcag
agcatcagcactctggacatttatgaacgagaggcacagatggtgtttgactattcaaca
ctggacagtggacttaagaccctcggtgaagagagtgaagtggaagctgagttggagaag
cttaaagatggcatctcctctttggagtccatgatcatgatgtccagagctcccaacctg
aaagctctagaaaagatcagagaggttaaggacagctttcgggaagtcatggatgcattt
gagaccagcacacacaccactaagaaatgcagtcaggagtttgagcaagtgaagtccaaa
cgcttcaatctcttcagccagtgctttgaacacgtgtctgtcatcattgaccagatctac
aagaaactctgcaggaactccagtgctcaggcaattctaagcgctgagaatccaaatgaa
ccctacctggatggcatcaactataactgcgtggctcctggtaaacgattcatggccatg
gacaacctgtcaggaggagagaaagccatcgccgctctcgctttggtctttgctattcac
agctttcgtcctgcccccttctttgtgctggatgaggtggatgctgccctggacaacaca
aatattggcaaggttacagggtttttccggatgatgtccagagagagctgccagatcatt
gtaatctccctgaaggaggagttctactcgcgggcagacgctcttcttggagtctattca
atgtttgatgactgcatgtttagccgtctgctcaccctggacctcacaccatacccactc
aatgacgagaacgccacagacagagagaagaacaaatga
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