Puntigrus tetrazona (Sumatra barb): 122331819
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Entry
122331819 CDS
T08985
Symbol
msi2a
Name
(RefSeq) RNA-binding protein Musashi homolog 2a isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122331819 (msi2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122331819 (msi2a)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122331819 (msi2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
122331819
NCBI-ProteinID:
XP_043085278
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MEADASQVTSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAS
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARSLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFSPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRATRGRSGYRAYPQNAGPGFPDYGFYSGPGDQRGAP
CSFADYATLGPHTGQMLQSEHVTSTCNSPSQHHPSPDHFKSSGANPPRPGGFPGANSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFNHSIAGPLIATAFTNGYH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgcaagtcaagtcacctctggaagtccgaatgattcgcaacacgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
ttcagtaaattcggagagatcagagaatgtatggtgatgcgcgaccccacaactaaacgc
tccagagggtttggcttcatcacgtttgcagatgtttccagtgtagataaagtcttagcg
caaccccaccacgaattagactccaagacgattgatcctaaggttgcctttcctcgacgc
gctcaacccaagatggtcacaagaacaaagaaaatatttgtgggtggattatcagcaagc
acagtcgttgaagatgtgaaacagtattttgaacagttcggaaaggtagaggatgccatg
ctaatgtttgacaaaactacaaacagacatagaggcttcggcttcgtaacgttcgagaat
gaagacattgtagagaaagtctgcgaaattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggcccaaccaaaggaggtgatgtttcctccaggcacgagggggagggcg
agaagtcttccgtacaccatggacgccttcatgctgggcatgggcatgttgagttaccca
aacattgtggcaacatacggtcgaggatacacaggattttctcctagctacagttaccag
tttccaggtttcccggcgacggcgtatggacccgtggcggcagcagcagtggcggcagcg
cgaggctcaggtagggcgacccggggaagaagcggctacagggcgtacccacagaacgca
gggccagggttccccgattacggcttttattctgggcccggtgaccagcggggcgccccc
tgctcctttgctgactatgccaccctgggtccccatacgggtcagatgcttcaaagcgag
cacgtcacctctacctgcaactcaccctcccagcaccacccaagcccagaccactttaag
agctcaggtgctaaccctccacggcctggaggtttccccggtgcaaacagtcctgggccc
gtggcagacttgtatggccccagcagtcaggactcagcagtgggaaattacatcagtgct
gccagccctcagccgggctccgggttcaatcacagtatcgcaggtcctttgatcgccaca
gcatttacaaatggataccactga
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