Puntigrus tetrazona (Sumatra barb): 122332168
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Entry
122332168 CDS
T08985
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122332168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122332168
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122332168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122332168
NCBI-ProteinID:
XP_043085409
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All DBs
Position
3:12895326..12900216
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AA seq
543 aa
AA seq
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MTSLGSSSSSTTEYVVRVPKNTSKKYNIMAFNAGDKVSCSTWTQARMERDMSNRRIYGEE
ETQEGAAGSEFGKKQREEARRKKYGIVTKEFKVEDQPWILKVNGKAGRRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHAWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGEDDEEEGEKGGKKKKKKGGRGGDLRIHDLEDDLEMSSDESDGSNGDDDEAKS
KAKKDKGPKGKGKKKKKKGSDLEGIEDSDDGDFEGLEVDYMSDESSSEEEEPEKTKPNKG
EDVPKGIDEMSDSEEESEEENKNEEEGKEEEEEEDGKKTPVQGEKKKKKDKGNLFLHFFF
VFERSDSSEDSDIEGEAASALFMVKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDNAATSN
TLRAAANKLEQGKRQTTVPSSETPAAKRLKMEPSPQSSSGKSTPQPASGKSTPSSSDVQL
TEDAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFY
LTE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgctgggtagcagcagttcctccacaacagagtatgttgtacgagttcctaaa
aacaccagtaagaagtacaacataatggctttcaatgctggtgataaagtcagttgttcc
acatggactcaggctcgtatggagcgtgacatgagcaacaggcgtatatatggtgaggag
gagacccaggagggggcagcaggcagtgaatttggaaagaaacagagagaggaagcacgg
aggaagaagtatggtatcgttacaaaggagttcaaggtggaggaccagccctggatcctt
aaagttaatggcaaggcaggaagaagattcaagggtctgaaaaaaggtggagtcacagag
aatgcttcctactacatcttcacacagtgtcccgatggggcctttgaggcgtttccagtg
cacgcttggtacaacttcacaccgcaggccaaacaccgcacgctcacagcagaggaggca
gaagaggaatggggaaggagaaacaaagtggtgaatcacttcagtatcatgcttcaacga
cgcctccgagaacaggagcgaggagaggacgatgaggaggaaggagagaagggggggaag
aaaaaaaagaagaagggaggcaggggaggagacctgcgcatacatgaccttgaggatgat
ttggaaatgagcagcgatgagagcgacggcagcaatggagacgatgatgaagccaagtca
aaagctaaaaaggacaaaggccccaaaggcaagggaaagaagaagaagaaaaagggcagt
gacctggaagggatcgaggatagtgatgatggtgactttgaggggttggaggtggactac
atgtctgatgagagcagttctgaagaagaagagccggagaagaccaaacccaacaaggga
gaggatgtccctaaagggattgatgaaatgtctgacagcgaggaagagagtgaggaagaa
aacaagaatgaagaagaaggcaaggaggaagaagaggaagaggatggaaagaagacacca
gtgcagggggaaaagaagaaaaagaaagataaaggcaatctctttttgcattttttcttt
gtatttgaaagatccgacagctctgaggacagcgatattgaaggagaggcagcttcagca
ctgttcatggtgaagaagcgcactcctcctaaacgagggggtggtcgtggctcagcaggt
agttcaagaacaggaagtcggcctggcacaccttctattgacaatgctgccacttccaac
actctccgtgccgctgccaacaaactggagcaaggtaagcgtcagacaactgtgcctagc
tcagagactccagcggccaagaggttaaagatggagcccagccctcagagctcttcaggg
aagagcacaccccaaccagcatcaggaaaatccactcccagctccagtgatgtgcagctg
acagaggatgccgtgcgcaggtatctcatcaggaagcccatgaccactaaagacctgctg
aagaagttccagactaagcgcacaggccttagcagcgagcaaacggtcaacgtgctcgcc
cagatcttgaagaggctcaacccagagaggaagaacatcaatgacaagatgcacttctac
ctcaccgagtga
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