KEGG   Puntigrus tetrazona (Sumatra barb): 122332283
Entry
122332283         CDS       T08985                                 
Symbol
wdr48b
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122332283 (wdr48b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptet03400]
    122332283 (wdr48b)
DNA repair and recombination proteins [BR:ptet03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122332283 (wdr48b)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 WDR54 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_like RAWUL Tfb2_C
Other DBs
NCBI-GeneID: 122332283
NCBI-ProteinID: XP_043085515
LinkDB
Position
3:4812939..4820656
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKFNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTG
TVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRNPDLRVLICEEKAPVLKM
ELDKSADPPQAIWVSTTKSFVNKWSLKGMHNFRASGEYDNDCSAPLTPLCTQPEQVIKGG
TSIVQCHILNDKRHILTKDSNNSVAFWDVLKACKGEDLGKVDFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVAAKDAGFTSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMEEEESELNHVNGEQESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDTESQTTSSSANDKPGEQEKEEDVAVIAEEKIELMCLDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacccatcacagacagaacgctgctggacggagaaaagtccaggtttcctacgtg
attagagacgaggtggagaagtttaatcgtaacggtgtgaacgctcttcagctggatcct
gctctcaacagactcttcacagccggccgagattccatcatcaggatatggagtgtcaat
caacacaaacaggatccttacattgcttcaatggagcatcacacggactgggtgaatgac
atcatcctctgttgtaatggaaaaacactgatatctgcctcctcggacaccaccgtgaaa
gtctggaatgcacacaaaggcttctgcatgtccacgctacggacacacaaggactacgtc
aaagctttagcatatgcaaaggacaaggagctggtggcatcggccggactggacagacag
atcttcctatgggatgtgaacacactgacagctctcaccgcctccaataacacagtcacc
acatcctcgctgagtggaaacaaggactccatctacagtctggccatgaaccagacagga
actgtgatcatctcaggatctacggagaaggttttgagggtctgggatccacggacatgt
gctaaactaatgaagctgaaaggccacactgacaatgtcaaatctttattgttaaacaga
gacggcactcagtgtctatctggtagctcggacggaacgatacgcttgtggtctctcggt
cagcagcggtgcatcgccacataccgggtccacgatgagggtgtgtgggcgcttcaggtg
aacgaggccttcacgcacatctactccggcggacgtgaccgaaaaatctactgcacagat
ctgcgtaaccctgacttacgtgtgctcatatgtgaggagaaagctcccgtcctgaagatg
gaattggacaaatcagctgatcctcctcaagctatttgggtgtcaacaactaaatcgttt
gtaaacaaatggtctctgaagggcatgcataacttcagagcgtctggagaatacgacaac
gactgcagcgcccctctaactccactgtgtactcagccagagcaggtcatcaaaggaggc
accagcattgttcagtgtcatattctcaatgacaagaggcacatactgactaaagactct
aataacagtgtggcattctgggatgtcctcaaggcatgtaagggggaagacctgggaaaa
gtggactttgatgaagaaattaaaaagaggttcaagatggtctatgtaccgaactggttt
tctgtagatctcaaaacagggatgctgaccatcacgctggatgaaagtgattgttttgca
gcgtgggtggcagctaaagatgctggttttacaagcccagacggctctgatccaaagttg
aatctgggtgggctgctcctccaggcgctgttagagttttggcccagaactcatataaac
ccaatggaagaggaggaaagtgaactcaaccacgtaaacggtgaacaggagagtcgaatt
caaaagggcaacggctacttccaggttcctccacacactcctgtcatctttggtgaagct
ggaggaagaacattatttaggttattgtgccgtgactctggaggagagacagagtccatg
ttactgaatgaaaccgtacctcagtgggtaattgatatcaccgtagataaaaacatgcca
aaattcaacaagatcccattctacctccaacctcattcatcatctggggccaaaacactc
aaaaaggaccgtctgtctgctagcgacatgcttcaggtgcggaaagtgatggagcacgtc
tacgagaagatcatcaacctcgacacagagtcacagaccaccagctcctcggccaatgac
aagccgggagagcaggagaaagaggaagacgtggcggtgatagccgaagagaagattgag
cttatgtgtttagatcaggttttggatccaaacatggacctcaggactgtaaagcatttc
atctggaagagcggtggagacctcaccctccattaccgacagaaatccacgtga

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