Puntigrus tetrazona (Sumatra barb): 122332488 Help Entry 122332488         CDS       T08985                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ptet  Puntigrus tetrazona (Sumatra barb) Pathway ptet04510   Focal adhesion ptet04512   ECM-receptor interaction ptet04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ptet00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122332488 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122332488 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     122332488 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ptet04147]     122332488 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:ptet00536]     122332488 (col4a1) Exosome [BR:ptet04147]  Exosomal proteins   Exosomal proteins of other cancer cells    122332488 (col4a1) Glycosaminoglycan binding proteins [BR:ptet00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122332488 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  122332488 NCBI-ProteinID:  XP_043085744 LinkDB All DBs Position Unknown AA seq 1639 aa AA seqDB search MRLPCVTVFLLAVSLSIDESTAKGGCSGSSCGGCDCSGVKGAKGEVGLPGLMGLVGFPGL PGPEGPPGPMGPKGDSGEAGAPGLKGNRGPPGVAGFPGRPGIPGLPGLEGPPGPHGIPGC NGTKGERGFDGIPGFPGVQGPPGIPGLKGVKGDPGGIIGAPIPQKGDKGFPGQPGSPGLK GNPGQQGPVGPTGPTGPAGRPGEPGQKGEPGDRLTFEGEKGQKGEKGLTGPPGPPGTLVG QESPGTTISGPKGETGSKGEKGERGSCAPHQPGMKGEQGPPGPIGKPGKDGQNGEKGDRG FSGTPGFDGSKLGGKRRKRTTGIWRWSSWPSWSSWPPWSRRRDRLSRRERGAPGPPGRYI PGPPGLPGSPGENGQKGDKGDDGQSLEGPRGADGQPGPPGPPGPIDKDCKIEKGSQGPPG PPGLQGEIGQKGNQGETCTDCTVFGSPGLPGPSGPKGQQGYPGQAGSKGEKGVTGPPGPS GIPGQDGSPGLMGAPGAHGEPGDVFVAPGLKGDKGLPGTTGDRGFPGVDGLPGKDGQPGL PGTKGEPARFGIKGDRGLDGDPGFPGPPGERGPPGLPGIGRPGEPGEKGSAGLPGSPGNP GLPGAKGEAGKIYSLPGPQGVPGPRGEVGRPGLQGDRGFPGERGISGFPGDKGDPGLPGI GLPGPPGPKGYSGIPGPAGIPGEPGRPGQDGLPGRAGTPGQKGEPGRGLPGPKGVVGQPG LPGFPGEKGNPGMPGVPGTEGRTGPPGLQGIKGTAGPPGARGAGGPPGPPGLGDPGPPGP MGPPGGPGPLGRIGIKGDKGSQGLPGLDMPGPPGDRGSPGVPGIPGPKGLPGELGPPGRD GFPGERGPKGEIGIMGTTGPPGHLGPVGNPGEPGPKGDPGLTGVRGVFGDQGPKGERGEP GIQGPPGNMSDIDMVHLKGDKGDIGDRGDPGPTGERGFTGTPGDPGMPGKDGMPGSPGQQ GQKGDPGVPGEPGQTGETGDPGARGDMGYPGSMGPKGIKGVGGSPGHPGFKGTDGSKGDK GEPGPAGIGMPGPPGQKGNVGSPGFPGEPGLKGQKGTMGIPGNPGTQGAKGDTGLVGYPG SPGKPGEKGVSGLPGSPGESGFQGRPGEPGLQGPPGQPGEKGEAGVDGIPGFVGERGEPG IPGTGFPGSRGEAGSKGDKGNPGLPGINGSPGIPGIKGEKGLPGFPGDQGHPGERGLPGI SMEGPKGDQGAQGQQGQKGVIGDPGPPGIPGSAGAKGEKGDVGFPGPQGSQGYKGDKGFT GASGEPGLPGYNGPKGEMGPQGVPGFPGTKGEHGVIGPKGDGGDRGFPGLKGTEGPLDHL GLHIYKGDPGLPGPQGPQGLIGIQGYPGQKGQQGVMGLQGLKGSDGTPGYNGHPGAKGEP GQTGPSGPRGYPGPPGPSGFPGGIGPPGPASMDHGFLVTRHSQSIDIPVCPAGTTPIYDG YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMP MSMAPVTGESIKPFISRCAVCEAPAMVIAVHSQTILIPPCPRGWDSLWIGYSFVMHTSAG AEGSGQALASPGSCLEEFRSAPFIECHGHGTCNYYANSYSFWLATIEDNEMFSKPVPTTL KAGNLRTHISRCQVCMKKV NT seq 4920 nt NT seq  +upstreamnt  +downstreamnt atgcggcttccatgtgtcaccgtttttcttctcgcagtttctttgagcatagacgagagt acagccaagggtggatgctcgggctcttcatgtggtggatgtgactgcagcggtgttaaa ggggcgaagggtgaggttgggctccctggtttgatgggcctcgtgggatttcctggattg ccagggcctgagggccccccagggcctatgggacctaagggagattctggggaggcagga gctccaggacttaaaggaaacagaggcccacctggtgtggctggtttcccaggacgtcca ggtattccaggtcttccaggtctagaaggtccaccaggacctcacggaatcccaggatgc aatggaacaaagggggagcgcggttttgatggaattccaggtttcccaggagtgcaggga ccaccgggtattccaggtttgaagggagtaaagggagatccaggtggtattattggagca cccatccctcaaaaaggagacaagggttttccaggacaacctggttcaccaggactaaaa ggaaatcctgggcaacaagggccagtcggcccaactggaccaactggacctgctggaagg cctggtgaacctggccaaaagggagagccgggtgacaggctgacgtttgagggtgagaaa ggacaaaagggagaaaaaggtttaactggtccccccggtccaccagggacattagtggga caagaaagccccggcacaaccatttctggaccaaagggtgaaacaggctctaaaggagag aaaggtgaaaggggctcctgtgcaccacatcaacctggaatgaaaggtgaacaaggacca ccggggccaatcggtaaaccagggaaagatggacagaatggagaaaagggtgatcggggc ttctctggtactcctggctttgatggctctaagttagggggaaaaaggagaaagaggacc accgggatatggcggtggtcgtcctggccttcctggtcctcctggcccccctggagcaga aggagagacaggttatccaggagagaacgtggagctcctggtccccctggcaggtatatt cctggtcctcctgggcttcctggctcccccggagagaatggccagaagggagataaagga gatgatggacagtctcttgaaggtccaagaggagctgatgggcagcctggcccccctgga ccgccaggaccgattgataaagactgtaaaattgaaaaaggatctcaaggccctcctgga cctcctggattgcaaggagagataggacagaaaggtaatcagggtgaaacatgcacagat tgcactgttttcggatcaccgggtttgcctggtccttcagggccaaagggtcaacaaggt tatcctggacaagcggggagtaaaggagagaagggtgtgacgggacctcctgggccttct ggaattcctggtcaagatggctctccaggtttaatgggtgcccctggcgctcacggtgag cctggtgatgtctttgttgctccagggctgaagggagataagggtttacctggcactact ggagacagagggtttccaggtgttgatgggttaccaggaaaagatggccagccagggcta cctggaacaaagggagagccagctagatttggtattaagggtgatcgcggcctggatgga gatcctggttttcctggccctccgggtgagagaggacccccaggtcttccaggcataggt cggcctggtgaacctggtgaaaaaggctcagcaggcctgcctggttcaccaggaaaccca ggtttaccaggagctaaaggcgaagctggtaaaatttatagcttacctggacctcagggt gtccctggacctcgtggagaggttggcagacctggtcttcagggtgacagaggttttcca ggtgaacgtggaatttcaggatttccaggagacaaaggtgaccctggactgccaggaatc ggcctgccggggcctccaggaccaaaaggatactctgggattccaggtcctgctgggatt ccaggagagcctggtcgaccaggtcaagatggcttgcctggtcgtgcaggaacacctggg caaaaaggtgaacctggcaggggtcttcctggtcctaaaggtgtcgtaggtcagccagga ctgccaggatttccaggggagaaaggtaatcctggaatgccaggggttcctggaactgag gggcgtactgggccacctggactacagggaatcaaaggtactgctggaccaccaggagct cgtggtgcaggggggccgccaggtcctccagggcttggggaccctggaccacctggacca atggggccacctggaggccctggacccctcggtcggattggtataaagggtgataaaggt tctcaaggcctacctggtttagacatgcctggccctccaggagacaggggtagccctggt gtcccaggtataccaggacctaagggtttgccaggggaactaggacctccgggtagggat ggcttccctggtgaacgtggtccaaaaggagaaattggaatcatgggaacgacaggaccc cctggacatttaggtcctgttggaaaccctggagagccaggaccaaaaggtgaccctggt ttgactggtgtcaggggagtgtttggtgatcagggtcctaagggtgagagaggagagccg ggcatacaggggccaccaggaaacatgagtgatattgacatggtgcatttgaaaggggac aaaggagacattggagacagaggtgatcctggtcccaccggagaaagggggtttactgga acaccaggagaccctggaatgccaggaaaagatggaatgccaggttcacctggacagcaa ggtcagaaaggagaccctggagtccccggggagccaggacaaactggagaaactggagac ccaggtgcaagaggagacatgggatacccaggttcaatggggccaaaaggtattaaaggt gttggtgggtcaccgggtcaccctggatttaaggggactgatggctccaaaggagataaa ggagagcctggtccagcaggaataggaatgcctggtcccccaggacagaagggaaatgtt ggttcccccggtttccctggtgaacctggactgaagggacagaagggtacaatgggcatc ccaggaaatcctggaactcaaggagctaaaggagacacaggattggttggttacccaggc agtccaggaaaaccaggtgaaaaaggtgtcagtgggttgccagggtctccaggagaatct ggatttcaaggacgtccaggtgaaccgggcctacagggtccaccaggtcaacctggggag aaaggcgaagcaggggtagatggcattcctggatttgtaggagagagaggagaacctggt atacctggcacaggttttccaggatcccgtggagaagctggcagcaaaggtgacaagggt aaccctggtcttcctggcattaacgggagtccaggcattcctggaatcaaaggtgagaag ggtctgcctggattcccaggggaccaagggcatccaggagagagaggacttccaggaata tctatggagggacctaaaggggaccagggagctcagggacaacaaggacaaaaaggtgtg attggtgacccaggcccacctggtatacctggcagtgctggagctaaaggagaaaaggga gatgtgggcttccctggcccacaaggctctcaaggatataaaggagataaaggtttcact ggtgcctctggtgagcctggattgcctggctataatggaccaaagggtgagatgggacca cagggtgttcctgggttccctggtacaaagggtgagcatggagtaattggtcctaagggt gacggaggtgacagaggattcccaggtcttaaaggtactgaaggccccctggaccacctg ggcctccacatttataaaggagatcctggtcttccaggacctcagggtccccaagggctg atcggaattcaaggctaccctggacagaaaggacaacagggtgtgatgggacttcagggt ttaaaaggatccgatggaacacctggctataatggacaccctggggccaaaggagagccc ggacaaaccggaccttctggccccagagggtaccctggacctccaggacctagtggtttc cctggtggcatcggccctcctggccctgcatcaatggaccacggcttccttgtaacacgc cacagtcagagtatcgatattccagtatgtccagcaggaacaacgccgatctatgatgga tattcactgctttatgtacaaggcaacgagaggtcacatggacaagacctaggcacagct ggtagctgcctaaggaagttcagcccaatgcctttcctcttctgcaacatcaacaatgta tgtaacttcgcttctcgtaatgactattcctactggcttacctctcccgagccaatgccc atgagcatggcccctgttaccggtgagagcatcaaaccctttatcagcagatgtgcagtt tgtgaggctcctgcaatggtgatagctgtgcacagtcagaccatactgatcccaccctgt cctcgtgggtgggattctctctggattggatactctttcgtcatgcacactagtgctggt gctgagggctccggtcaggcgctggcctccccaggttcttgcctggaagagttccgctca gctcccttcatcgagtgtcacggtcatggcacctgcaactattatgctaactcctacagc ttctggttagccaccatagaggacaacgaaatgtttagcaaacctgtccccacaacgcta aaggctgggaatctacgaactcacatcagcaggtgtcaagtgtgcatgaagaaggtatag

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