Puntigrus tetrazona (Sumatra barb): 122332543
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Entry
122332543 CDS
T08985
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122332543 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122332543 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122332543 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122332543 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122332543 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122332543 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122332543 (thbs4b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Phagocytosis
Opsonins
122332543 (thbs4b)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122332543 (thbs4b)
Exosomal proteins of colorectal cancer cells
122332543 (thbs4b)
Exosomal proteins of bladder cancer cells
122332543 (thbs4b)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122332543 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
EGF_MSP1_1
DUF7630
Motif
Other DBs
NCBI-GeneID:
122332543
NCBI-ProteinID:
XP_043085797
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MTGTMRLLAAVSLILTLSSASAESTVYNLLTSPDCLPDLLHGGLAEQGVTELFILTTFRL
QPRTGNTIFSLYNPRDNSKYFEFSVLGKLNKATLRYLRRDGRMSTVTFNNLKLADGEKHR
LLFHLKGLEVGQPRGFPHNQGALPVPGVELHLDCRLVETLRDLPAVFNGLNNNQGVELKT
MLGKAQEELEELKLAYGDSVENVASLQDCHTHQSDSVQTLGLNTKQLTNQMLELTKVINE
LKDVLIQQVKETSFLRNTISECQACGLEGAEVVKPKCTPGVCFRDDMCIETAEGVECGPC
PDGYTGDGYSCDDVDECQFNPCFPGVRCVNMAPGFRCEACPLGFTGKPLEGVGVAYAQTH
KQVCDDIDECKGPDNGGCTPNSVCVNSVGSYQCGRCKTGFTGDQIRGCKPEKSCGNRLQN
PCDPNAQCIEERDGTITCQCGIGWAGNGYLCGKDTDIDGYPDEKLRCRDPTCRKDNCVTV
PNSGQEDADGDGKGDACDPDADGDGILNEQDNCWLTPNINQLNSDKDSHGDACDNCIRVD
NPDQRDTDSDGLGDACDDDMDGDGLKNFLDNCQRVKNRDQLDRDGDGVGDACDSCPDIPN
PNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPLVMNSSQLDTDKDGLGDECDDDDDND
GIPDTLPPGPDNCRLVPNPDQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEITLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLR
NSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGSELVADSGV
TIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGMDPL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaccatgcgtctcctcgcggccgtttctctgatcctgactctcagctccgca
agcgcagaatccaccgtgtataacctcttaacgtcgccggactgcctgccggatctgctg
cacggaggtttggccgagcagggagtaacagagctctttattctcaccaccttccgtctc
cagcctcgaaccggaaacaccatattcagtctctacaatccacgagacaacagcaagtac
tttgagttttctgtgctcgggaaactcaacaaagctactttacggtacctgcgcagagat
ggtaggatgagtaccgtcaccttcaacaacctgaaactggctgatggtgagaagcaccgc
cttctcttccatctgaagggactggaggtgggccaaccaagaggtttcccgcacaaccag
ggggcgttaccggtgcctggggtggagctccacctggactgcaggctggtggagacgctg
agagatttaccagctgtgtttaacggcctaaacaataaccagggagtggagctcaaaact
atgctggggaaagcacaagaggagttggaggagctcaaactggcatacggtgattcagtg
gaaaatgttgcatcgctgcaggactgccacactcatcagagcgactccgtacagacttta
ggtctaaacacgaaacagctcacaaatcagatgctggagctgacaaaggtcattaatgag
ctgaaagatgttcttattcagcaggtgaaggaaacatctttcctcagaaacaccatctct
gagtgccaggcctgtgggcttgaaggagcggaggtggtgaaaccaaagtgcactcctgga
gtgtgtttccgggatgacatgtgtatagaaacagctgaaggggtggagtgcggcccatgc
cctgatggatacactggagacggatacagctgtgatgacgttgatgagtgccagtttaat
ccctgcttccctggcgtgaggtgtgtgaacatggcgccaggtttccgctgtgaggcatgt
cctcttggattcaccggcaaaccactggagggtgttggtgtggcttatgcacaaacacac
aagcaggtgtgtgatgatatcgacgagtgtaaaggaccagataacggaggatgcacccct
aactccgtctgtgtgaattctgtgggatcatatcaatgtggccgatgtaagaccggattt
acaggtgaccagattagaggatgcaagccagagaaaagctgcggaaaccgcctacagaat
ccttgtgaccccaatgcgcagtgcatagaggaaagagatggcaccatcacatgccagtgt
ggcattggatgggctggaaacggttatctctgcggtaaggacactgacatcgatgggtac
cctgatgagaagctgcgctgccgagacccaacctgcagaaaggacaactgtgttaccgtt
ccaaactcgggacaagaggacgcagatggcgacgggaaaggcgatgcttgtgacccagat
gcagatggagatggaatacttaatgagcaggataactgctggctgacgccaaatataaat
caactaaacagtgataaggacagccatggcgatgcatgtgacaactgtatccgagtggat
aacccagaccagagagacacagattcggatggcctcggagatgcatgcgatgatgacatg
gatggagatgggttgaaaaacttcctggataactgccagcgagtgaaaaatcgtgaccag
ctggatcgtgatggggatggggtgggagatgcctgtgatagctgtcctgacatcccaaat
cctaatcagtctgacattgacaatgatcttgtcggagattcttgcgacacaaatcaagat
agtgatggtgacggtcaccaagatagcaaagacaactgcccgctggtaatgaacagctcc
cagctggacacagataaagacggactgggagatgaatgtgacgatgatgatgataatgac
ggtattcctgacacactccctcctggaccagataactgccggttggtgcccaaccctgac
caaatagatgacaacaatgatggagtgggcgacatatgcgaatcagactttgaccaagac
aaggtcatcgacaggatcgataactgcccagaaaatgcagagatcacactcacagacttc
agagcctatcagacagttgtacttgacccagagggcgatgctcagattgaccccaactgg
gtggttcttaaccagggaatggagattgtccagactatgaatagtgaccctggccttgct
gttggttacacggcattcagcggtgtcgatttcgagggaaccttccatgtgaatacggtg
actgatgacgactatgccggcttcatctttggctaccaagactcttccagtttctatgtg
gtgatgtggaagcaaacggagcagacgtactggcaggccacacccttcagagccgtagct
gaacccggcattcagctgaaggccgtgaagtccaagactggtccaggagagcatttgagg
aactctctctggcatacaggagacactaatgatcaggtgcgtctcctgtggaaggatcca
agaaacgttggctggaaggataaggtatcataccgctggtacctgcagcaccgcccgcaa
gtcggatacatcagggttcgtttctatgagggatcagagcttgtggcagattctggggtg
acaattgataccacaatgagaggaggaagactgggagtgttctgcttctctcaagagaac
atcatctggtcaaacttgaagtaccgctgcaatgacaccattccagaggacttccaggag
ttcagtacgcaacatggcatggaccccctgtaa
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