Puntigrus tetrazona (Sumatra barb): 122332663
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Entry
122332663 CDS
T08985
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04136
Autophagy - other
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122332663
04136 Autophagy - other
122332663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122332663
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122332663
Membrane trafficking [BR:
ptet04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122332663
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122332663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
122332663
NCBI-ProteinID:
XP_043085976
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MIEPIPEIRTGEKVRRSGSSPDRERSDGYPELQRLFCASFNQDATSLAVGGKNGYRLFSL
SSVDRMDCIHQGEESPEVYIAERLFSSSLVVVVSRSTPFRMNVYHFKKGTEICNYSYSNN
ILAVRLNRQRLVVCLEEALYIHNIKDMKLLKSLLNTPPNPKGLCALSVSHSSSYLAYPGS
SAAGEIALYDALNLNPVSVISAHASHVAAVAFDASGTRLASASEKGTVIRVFGVPDGVKL
FEFRRGMKRYVSISSLSLSADAEFLCASSNTETIHVFRLERGPSEEPPSWSGYMGKMFSA
VGTYLPSQVSDMMHQDRAFATVRLDVAGARSVAALSTIQKFPRLLVASLDGLLYIYNVDP
REGGDCHLVKKHRLFDREDESDPEAGGPSYAETVATSPKTDSPSSASLTGFSEDVGVKRG
ELIPEHEFAVGPVRLDDEREFPPVGFQHR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaccgatcccagagatccgaaccggagagaaggtgcgaagatccggttcctct
ccagacagagagagatctgatggatatcccgaacttcagagactcttctgcgcttccttc
aaccaggacgcgacgtctttggctgttggtggtaagaatggctacaggcttttctccctg
tcctctgtggacagaatggattgcattcatcaaggagaggaaagccccgaggtgtatata
gcggagcgtctcttctccagcagcctggtggtggtcgtgagcagatccacacccttcaga
atgaacgtctatcatttcaagaaaggcacagagatctgtaactacagctactccaacaac
atcctcgctgtccgactcaaccgacagaggcttgtcgtttgtctggaggaggctctgtac
atccacaacatcaaggacatgaagctcctcaagtctcttctcaacacgccgccaaacccc
aaaggtctctgcgcgctgtccgtcagtcattccagctcatatctggcgtatccagggagc
tccgccgccggagagatcgctctgtatgacgctttgaatctgaatccggtgagcgtgatc
tcggctcacgccagtcacgtggccgccgtcgcgttcgacgcttcggggacccgtctggcc
agcgcttctgaaaagggcaccgtcatacgggttttcggcgttcccgacggggtcaagctg
ttcgagtttcgccgagggatgaagaggtacgtcagcatcagctctctgtcgctcagcgcc
gatgccgagtttctctgtgcctccagtaacaccgagaccatccacgtcttcagactggag
cgcggtcccagcgaggagcctccatcatggtctggatatatggggaagatgttttcggcg
gtcggcacctacctgccctctcaggtgtcagatatgatgcaccaggacagagcgtttgcg
accgtccgcctcgacgtggccggagcgaggagcgtagcggctctgtccacgatccagaag
tttccgcgtcttctggtggcttcactagatggtcttctctacatctacaatgtagatcct
cgggaaggaggagactgtcatttagtgaagaagcacagactgtttgacagagaagatgaa
tcagacccggaggccggcggcccgtcgtacgccgaaaccgttgccacgagcccaaaaaca
gactctccgtcttccgcttccctcacaggtttctctgaagatgttggcgtgaagagagga
gagctgatcccggagcacgagtttgccgttggacccgtccgtctggatgatgaacgcgag
tttcctccggtcggctttcagcacagatga
DBGET
integrated database retrieval system
