Puntigrus tetrazona (Sumatra barb): 122332703 Help Entry 122332703         CDS       T08985                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism ptet  Puntigrus tetrazona (Sumatra barb) Pathway ptet04510   Focal adhesion ptet04512   ECM-receptor interaction ptet04518   Integrin signaling Brite KEGG Orthology (KO) [BR:ptet00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122332703    04518 Integrin signaling     122332703  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122332703  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ptet00536]     122332703 Glycosaminoglycan binding proteins [BR:ptet00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122332703 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd TILa Motif Other DBs NCBI-GeneID:  122332703 NCBI-ProteinID:  XP_043086010 LinkDB All DBs Position Unknown AA seq 1495 aa AA seqDB search MVLSADSRTLLLFVATLGAFLAVVKCQEENDQDPGSCTQDGQFYRDKDVWKPEPCRICVC DTGTVLCDEIICEELKDCPKPEIPFGECCPVCAADQPSSPGLPGAKGQKGEPGDITDVVG PRGPSGPMGPPGEQGPRGDRGDKGEKFFLSLGKSGARGRDGEPGTPGNPGPPGPPGPNGP PGLGGNFAAQMAGGFDDKAGGAQMGVMQGPMGPMGPRGPPGPNGSPGPQGFQGNPGEAGE PGSSGPMGPRGPPGPSGKPGDDGEAGKPGKAGDRGPSGPQGSRGFPGTPGLPGIKGHRGY SGLDGAKGEAGATGAKGESGSSGESGAPGPMGPRGLPGERGRPGPSGASGARGNDGAPGA AGPPGPVGTAGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGVPGSSGPSGISGNPGT DGNPGAKGSVGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDTGLAGFKGEAGPKGE IGNAGPQGAPGPGGEEGKRGPRGEPGALGPVGPAGERGAPGNRGFPGQDGLAGPKGAPGE RGSSGVSGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAAGEDGRPGPPGP QGARGQPGVMGFPGPKGGNGEAGKSGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGE RGEQGQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAGGATGPRGERGFPGERGGVGP QGLQGPRGLPGTPGTDGPKGGVGPAGTPGAQGPPGLQGMPGERGASGIPGPKGDRGDNGE KGPEGAPGKDGARGLTGPIGPTGPGGPNGEKGESGPAGPSGAAGTRGVPGDRGETGPPGP AGFAGPPGADGQPGAKGEQGEGGQKGDAGAPGPQGPSGAPGPQGPTGVSGPKGARGAQGP PGATGFPGAAGRVGPPGPNGNPGPAGPAGPPGKDGPKGVRGDGGPPGRPGDAGLRGAAGT PGEKGDPGEDGPPGPDGPAGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGG PGDRGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSAGIKGDRGDTGSAGAPGAPGG TGAPGPVGPTGKQGDRGEAGPKGPAGAPGPAGARGMPGPQGPRGDKGEAGDSGERGQKGH RGFTGLQGLPGPPGQPGDQGASGPAGPGGARGPPGPVGPAGKDGSNGLPGPIGPPGPRGR SGETGPSGPPENPGPPGPPGPPGPGIDMSAFAGLSHPEKGPDPLRYMRADQAAEGDRQND AEVDATLKSLNNQMENIRSPDGTKKSPARTCRDLKLCHPDWKSGEYWIDPNQGCTVDAMK VFCNMDTGETCVYPKPTNIPRKSWWTSKGAERKHVWFGEAMNGGFHFGYGDDNLAPNTAS IQMTFLRLLSTEASQNLTYHCKNSIAYMDEATGNLKKALLLQGSNDVEIRAEGNSRFTYS VLEDGCKKHTGQWSKTVIEYRSQKTSRLPIVDIAPMDIGGAHQEFGVDVGAVCFL NT seq 4488 nt NT seq  +upstreamnt  +downstreamnt atggtcctgtcggcggattctaggactttactgctatttgtggcaacactaggcgcattt ttggccgtggtcaaatgccaagaggagaatgaccaagaccccggcagctgcacacaggac ggacagttctatagggacaaggacgtgtggaagccagagccgtgtcgtatctgtgtttgc gacaccggcacggtcctgtgcgacgaaatcatctgcgaggagttgaaagactgtcccaaa cctgagatcccgtttggggagtgctgtccagtctgtgccgctgaccagccctcctcccct ggcttgccaggtgctaagggacaaaagggagaaccaggagacataacagatgttgtggga ccgaggggtccgtccggtcctatgggacctccaggagaacaagggccccgaggagaccga ggagacaagggggagaagttttttctgtctttagggaagtccggggcccgtggaagagat ggtgagccggggacccctggaaaccctggaccccctggaccgccagggccgaacggacct ccaggcctcggaggaaactttgctgctcagatggctggtggatttgatgacaaagctgga ggagcacagatgggagtgatgcaaggaccgatgggtccgatgggtcctcgaggaccgcca ggccccaacggatctcctggcccgcaaggatttcaaggaaaccctggagaagccggagag cccggatcatccggcccaatgggtcctcgtggccccccgggtccctcaggaaaaccagga gatgatggagaagcaggcaagcctgggaaagctggtgatcgtggaccctctgggcctcag ggatctcgtggattcccaggaacaccaggtctacctggaataaagggacacagaggttat tcaggtctggatggagctaaaggagaggccggagccactggagctaaaggggagtctggg tcttctggtgaaagtggagctcctggaccgatgggtcctcgtggtttacctggtgaacga ggacgtccaggaccatctggagcttctggtgctcgagggaacgatggagctcctggagct gctggtcctcctggtccggtcggaacggctggagctccaggcttcccaggatcccccggt tctaagggtgaagcaggacctaccggagccagaggacctgaaggagcacaaggaccccgc ggagagtcaggtgtccccggatcctcaggaccttctggaatttctggaaaccccgggact gatgggaatcctggagctaaaggatcagtgggtgctcctggtatcgctggggctcctggt ttcccaggccctcggggccctcctggacctcagggagcgactggacctctggggcccaag ggacagtctggtgacacgggtctcgcaggcttcaagggtgaggctggacctaaaggagaa attggcaacgctgggcctcaaggggcccctggccccggtggagaagaaggaaagcgagga cccagaggagagcctggcgctcttggacccgtcgggccggccggagagagaggagctcct ggtaaccgaggttttcctggacaagatggtctggctggaccaaagggtgctccgggcgag cggggatcttcaggagtgtcgggacctaagggagccagtggagatccgggccggcctggt gaaccgggtctgcctggtgcacggggtctgacgggacgcccgggtgatgccggtccacag gggaaagttggtccttctggtgctgctggtgaagacggccgtccgggccccccggggcct cagggtgctcgcggtcagccgggagtcatgggattccctggacccaagggaggcaatggt gaagctgggaagtctggagagaagggccttgctggagctccgggtctgcgtggtctgcct gggaaagatggagagacgggtgctgctggacctcctggacccgctggtcctgcaggagag agaggagagcagggtcagcctggaccgtccggcttccagggtcttcccggacccccaggg ccccccggtgagggcggtaaacctggagatcagggtgttcctggagaggcaggggccgga ggggccaccggaccacgcggtgaacggggtttccccggagagagaggaggagtggggccc cagggcctccaggggcctcgaggtcttccaggaactccaggaactgatgggcccaagggt ggcgtgggcccggcgggaactcctggtgctcaggggcctccgggactgcaggggatgcct ggagagagaggtgcgtccggcattcctggaccaaagggagaccgaggtgacaacggtgag aaaggacctgaaggagctcctgggaaagacggcgcaagaggtttaacgggtccaatcggt cctactggtcctgggggacccaatggtgaaaagggagagtctggacctgctggaccgtct ggagctgctggtactcgcggtgttcctggtgacagaggagagactggtcctcctggtcct gctggatttgctggtcctcctggtgcagatgggcagccgggggctaagggagagcagggt gaaggtggacagaagggtgatgctggtgcaccgggccctcaggggccttctggagctcca ggtcctcagggaccaactggtgtgtctggaccaaaaggggctcgcggtgctcaaggacct cctggtgccacaggtttccctggagctgctggtagagttggacctcctggtcccaatgga aacccgggtccggctggtcctgctggtcctcctggtaaagatggtcctaagggtgtgcgt ggagacggtggtcctcctggaagacctggggatgctggcttgcgtggggcggctgggact cctggagagaagggagatcctggagaggatgggcctcctggtccagatgggcctgctggt cctcagggtctggctggtcagcgtggtattgttggacttccaggacagcgtggtgaaaga ggttttcccggcctgcctggaccctctggtgagcctggtaaacaaggagctcctggagga cctggagaccgtggaccccctggacctgtgggaccgcctggtctgacaggacccgctggg gaacctgggagagagggcaatcctggatctgatggtcctcctggccgagatggttctgca ggaataaagggtgaccgaggagacactggatccgcgggcgctcctggtgctccgggcggc actggtgctcctggtccggtcggacccaccggtaaacagggagaccgaggagaggctgga cccaaaggacctgctggagctcctgggcctgctggagctcggggaatgcctggaccacaa ggcccacgtggagataagggagaggctggcgattcgggtgagagagggcagaaaggacac cgaggattcactggtcttcaggggctgcctgggcctcctggccaacctggtgaccaagga gcttctggacctgctggacccggtggagcaagaggacccccaggccccgttggtccagct ggaaaagacggatcaaatggtttgcctggccccatcggaccacccggacctcgcggtcgt tctggagagactgggccatccggccccccagagaatcctggcccccctggtcctcctggc cccccagggcccggcatcgacatgtctgctttcgctggtctgtctcatcctgagaagggt cctgaccccctgcggtacatgagggcagaccaggctgctgaaggtgaccgccagaacgat gcagaggtggatgccactctgaaatccctaaacaaccagatggagaacatccgcagtcct gatggcactaagaagagcccggcccggacctgcagagacctgaagctctgccaccctgac tggaagagcggtgaatactggattgatcctaaccagggctgcaccgttgatgccatgaag gtcttctgcaacatggatactggcgagacctgtgtttatccaaaacccactaatatccca cgcaagagctggtggacttccaagggtgcggaacgcaagcacgtttggttcggagaagcc atgaatggtggattccattttggctatggagacgacaatctggcacctaatacagcaagc attcagatgactttcctgagactgctgtccaccgaggcctctcagaacctcacctaccac tgcaagaacagcattgcctacatggacgaggccaccggaaatctgaaaaaagctctgttg ctgcaggggtccaatgatgtggagatccgtgcggagggcaacagccgcttcacatacagt gttcttgaggatggctgcaagaaacacacaggccagtggagcaagacagtcatcgagtac agatcacagaagacttcacgcctgcccattgtggacattgcccctatggatattggagga gctcatcaggagtttggagtggatgtgggtgctgtctgtttcctgtaa

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