Puntigrus tetrazona (Sumatra barb): 122333080
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Entry
122333080 CDS
T08985
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122333080 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122333080 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
122333080
NCBI-ProteinID:
XP_043086512
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MMSGASLSERRCAKMERGLSLAQIFGGTLICISLVSQVVSEERTVRYKIYEEVRPPTVIG
TLASNVTWTPDKTRRTFPGIRFKLMSPSTGSFIRFRESDGRLTVEERVDRERICKRNPRC
VITFDVAFVSAEQFELFHVEVEVLDVNDNSPVFPRTDCTVEISESAALGTRVALDAAEDA
DVGSNSIQTYQLSENAHFSLDVITRVDGVKYAELVLVKELDRESRAFFALKLVAADGGNP
AKSGATNVTVKVKDANDNSPLFDHSHYSVDVPEDTPVDSLLLDLNAVDPDEGLNGQVVYE
FGKQVTTKIRQLFKLDYKTGHLTLQSPVDYEDETTYEIDVQASDLGHNPVASVCKIIVNI
RDVNDNPPEIIITSITSVTDGVAHVSEATGPDILVALISIKDKDTGANGQVSCTLNGGHG
NFRLKRAYEGSYTIVTMAPLDREKIAEYNLTVVAEDFGVPPLRTVTHYIIRLTDVNDNAP
TFSAKIYEGFIEENQLPGTYITTILASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGN
VYALQSFNYEVTKRLDLRVQASDRGWPQLHNNAVLIINVVDQNDNAPSITQPPLVNGSAE
IQLPRDAPPGYIVTRIAAKDSDAALNAELTYKLYDGGDFGFAIDPNTGEIYINRKIAYDE
YDLWKVLVTVNDNGHPSLTSTATIHFTLTESAPSNGNFYDEREDGEPKQWTLILILALTS
SSLLFLAILSYILCKSRKNGQKRQASLPDAVDIPYDKEHNAVSVISSQTANVFDTHAFHS
TTVIGTPEKLHNSVQATAEVFNETPQTFKSKYRSVAGEIDGYSTLPGYGKDNARPITVWK
GNSMMTIAVRDPQISGKDSGKGDSDVNDSDSDISEGLKKDYTSYKGLWACTSECRILGHS
DRCWSPSASRTGGSTASRHLSTFSRTRPSSHATLQRSNYDSRSVALHSLTEDQQSPYDYI
HICSPQSQRRRDSENSDVFTHSTKPISTDSPGRFTQA
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcggcgcgtctctctccgagcgcaggtgcgctaagatggagcgaggactctcg
ctcgcgcagatatttggaggcacgctgatatgcatctcgctggtgtcacaggtcgtttct
gaggaacggacggtgaggtataagatatacgaggaggtccggccgccgacggtcatcgga
actctagccagcaacgtaacgtggaccccggacaaaacgcgcaggactttcccgggaatc
aggtttaagctcatgagcccctccaccggctccttcatccgattcagggaaagcgacggg
aggctgacggtggaggagcgcgtcgaccgcgaacgcatctgcaagcgcaacccgcggtgc
gtgatcacttttgacgtcgcgttcgtgtccgccgagcagttcgagctctttcacgtcgag
gtggaggtgctggacgtcaacgacaactcaccggtgtttccgcgcaccgactgcaccgtc
gagatctccgagagcgcggcgctcgggacgcgcgtcgcgctggacgccgccgaggacgcg
gacgtgggctctaactccatccagacctaccagctgagcgagaacgctcacttcagcctc
gatgtcatcacgcgggtggacggggttaaatatgcggagctggtgctcgtcaaagagctc
gaccgcgaatcccgcgcttttttcgcgctcaaactcgtggcggcggacggcgggaatccg
gcgaagagcggcgccactaacgtcaccgtcaaagtgaaggacgccaacgacaacagcccg
ctgtttgaccacagccattactccgtggacgtgccggaggacacccctgttgattcgctg
ctgctggacttaaacgccgtcgacccggacgagggtctcaatggacaagtcgtttacgaa
ttcggcaaacaggtcacaaccaagatcaggcaactgtttaaactggattacaaaactgga
catctgactttgcaaagccctgtggactacgaagacgagaccacgtatgaaatcgacgtg
caagccagcgatttaggacacaaccccgtggcctcggtgtgcaagatcatcgtcaacatc
agagatgtgaacgacaacccgcctgaaataatcatcacgtctatcacgtcagtaacagat
ggcgtcgcacatgttagcgaagctacaggtccagacatcctggtggctttaattagcatc
aaagacaaggacacgggagcgaacgggcaagtgagctgcactctgaacggcggacatgga
aatttcaggcttaaaagagcgtacgaaggcagctacacgatagtcaccatggctcctttg
gatagagagaagatcgcggagtataatttgactgtagtggcggaggatttcggtgtaccg
ccgttacgcacggtaactcattacattataaggcttacggatgtcaacgacaacgcgccg
acgttcagcgccaagatatacgaaggcttcattgaggagaatcaactcccgggtacctac
atcactacgattttagccagcgatcaggattctgggcttaacggggagataacctacgag
cttttcgattcggacaccaacagcgtctccaggttcgcgattatgaatcaagcggggaac
gtttacgccttgcaaagtttcaattacgaggtcacgaagcgcctcgaccttcgcgtccag
gccagcgaccgagggtggcctcaacttcacaacaacgccgtgctgattatcaacgtggtc
gaccagaacgacaacgcgccttcgataacgcaacccccgctggtcaacgggtccgccgaa
atccagcttcccagagacgcgccgcccggttatatcgtgacccgaatcgcggcgaaagat
tcggacgccgctctgaacgcggagctcacgtacaaactctacgacggcggcgatttcggt
ttcgccatcgatccgaatacgggggaaatatacatcaaccggaaaatcgcttacgacgag
tacgacttatggaaggtcctggtgacggttaacgacaacggccacccgtcgctaacctcg
acagccacgattcatttcaccctaaccgagtccgcgccctcgaacggcaacttttacgac
gaaagagaggacggcgaaccgaaacaatggacgcttattttaatcttggctttgacgagt
tcctcgctgctgtttttggctattttatcgtacatactatgcaaaagtcgcaaaaacggt
cagaagagacaagctagccttcccgatgcggtggatattccgtacgataaagagcacaac
gccgtgtcggtgatctccagccagaccgccaatgtgttcgacacgcatgcgtttcactcc
acgaccgtcatcggcacgcctgagaaactacacaacagcgtgcaggcgacggccgaagtt
tttaacgaaaccccgcagaccttcaaaagcaaatataggagcgtggcgggggagatagat
ggatattccactttgcctggttacgggaaagacaacgctcgacccatcacggtgtggaaa
ggaaactccatgatgaccatcgcggtccgagacccacagatcagcggcaaagacagcggg
aaaggagacagcgatgttaatgacagcgattctgacatcagcgaaggcctcaagaaagac
tacacctcatataaagggctgtgggcctgcaccagcgagtgcaggatcctgggtcactcg
gacaggtgctggagcccgtccgcgagcaggaccggcgggagcaccgccagcagacacctg
tccaccttctcgaggacgaggccgtcctcacacgccacgctccagaggagcaactacgac
agcaggagcgtggccctgcacagcctcacagaagaccagcagagtccgtacgattacatt
cacatctgctctccgcagtcgcagcggagacgggactcggagaacagcgacgtcttcacg
cactccaccaaacccatctccacggacagccccggcagattcacgcaagcctga
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