Puntigrus tetrazona (Sumatra barb): 122333212
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Entry
122333212 CDS
T08985
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04136
Autophagy - other
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122333212 (wipi2)
04136 Autophagy - other
122333212 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122333212 (wipi2)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122333212 (wipi2)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122333212 (wipi2)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122333212 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_IFT140_1st
Beta-prop_Vps41
BCAS3_WD40
Dimeth_Pyl
Motif
Other DBs
NCBI-GeneID:
122333212
NCBI-ProteinID:
XP_043086668
LinkDB
All DBs
Position
3:complement(15829121..15836384)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPFGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLD
GSAEPANEILEQTAHDRPLVAQTYSAAVAKGYTEDQGAVGGAGVEDDMNTLHLDEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggataacacatccctagctgttggtaccaagtccgggtacaagttcttctccttg
tcatcagtggacaaattggaacaaatctatgaatgtactgacacagaagatgtgtgcatc
gtggagagattgttctccagcagccttgtcgctattgtcagccttaaggcacctaggaag
ctgaaagtctgtcacttcaagaaagggactgagatatgcaactacagctactcaaacact
atactggctgtaaaactaaacagacagagattgatagtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctccgaatcct
ttcggactgtgtgccctgtcaataagtaatgacaactgttacttggcctatccgggaagc
gcaacaattggagaggtgcaagtttttgacacagtcaatctgagggcagctaacatgata
cctgcccatgatagtccgctagcagcactggcgtttgatgcaagcggcactaaattggcc
acagcatctgagaagggcactgtaatccgagtgttctccattccagaaggccaaaagctc
tttgagttccggaggggagtgaagagatgtgtgagcatctgttccctcgccttcagtatg
gaggggctctatctgtctgcctcaagcaacacggagacggttcatatttttaagctggag
acccagagagagaagtcagtgcctcaagaggagcccactacttggactggatacttcggg
aaagtactgatggcctccacaacatacctgcctgcacacgtaacggagatgttcactcag
ggaagggcatttgctacagtcagactgcccttttcaggtcataagaacatctgcgctctg
gccataatccagaagatcccacgtctgctggtggctgcagcggatggctatctttacctg
tacaatctggatccacaagaggggggagagtgcacactaatgaagcagcataagttagat
gggagtgcagagccagcgaatgaaattctcgagcagacagctcacgaccggccacttgtg
gcacagacctacagtgctgccgttgccaaaggttacactgaggatcagggggcggtaggg
ggtgctggagtggaggatgacatgaacaccctgcacctggacgaagagaacgagcagcct
ccgttaatcctggaaacagactga
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