Puntigrus tetrazona (Sumatra barb): 122333223
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Entry
122333223 CDS
T08985
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04144
Endocytosis
ptet04517
IgSF CAM signaling
ptet04519
Cadherin signaling
ptet04530
Tight junction
ptet04810
Regulation of actin cytoskeleton
ptet05100
Bacterial invasion of epithelial cells
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122333223 (arpc1b)
04519 Cadherin signaling
122333223 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122333223 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
122333223 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122333223 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122333223 (arpc1b)
05100 Bacterial invasion of epithelial cells
122333223 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122333223 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122333223 (arpc1b)
Membrane trafficking [BR:
ptet04131
]
Others
Actin-binding proteins
Arp2/3 complex
122333223 (arpc1b)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122333223 (arpc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
eIF2A
PEP5_VPS11_N
EIF3I
Beta-prop_TEP1_2nd
RMC1_N
WDR90_beta-prop_4th
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
122333223
NCBI-ProteinID:
XP_043086689
LinkDB
All DBs
Position
3:15823776..15828983
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGSNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKP
APTAWGSKMPFGEIMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCASL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNKAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKATADSKEAVLESVHKNSISQISVLNGGKAQCAKFCTTGMDGGMAIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcacagttttcttcttgaacctatcagctgccatgcctggaacaaggaccga
actcaaattgcactgtgtcctaataaccacgaagtccatatctacaagaaggatggaagc
aactggaacaaaatccatgtgctgaaggagcacaacggccaggttactggcattgactgg
gccccagagagcaatcgtattgtgacctgtggcactgaccgtaacgcctatgtctggacc
ctaaagggagatgcatggaagcccaccctggtcatcctcaggatcaaccgtgctgctcgc
tgtgtgaaatggtctcctaaagaaaacaagtttgcagtgggcagtggctcacggctgatc
tcagtctgctattttgagcaggataatgactggtgggtgtgcaagcacattaagaagccc
atccgctccaccattctttgtttggactggcaccccaataacatccttttggcagctgga
tcgtgtgactttaaatgcaggatcttttccgcttacataaaggaagtagaagagaagcct
gctccaacagcgtggggctcgaaaatgccctttggagagatcatgtttgaatctactgga
acttcaggttgggtacacggtgtttgtttttcggacagcgggaatcgtgtggcctgggcc
agccatgacagcaccgtggcagtggctgagggaggaaagactgctgtctgcgccagtctg
acttcagaaaccttgcctcttctgtgtgtgactttcattactgagaacagcctagttgca
gctggccatgactgctaccccgtgttgtttgtctatgattcgaacaaagcagccttgtct
tttggagggaaactcgatgtgcccaaacagagtgctcagaagggcatgacagccagagaa
cgcttccagaacctggataagaaagccactgctgacagcaaagaagccgttctggagtct
gtgcacaagaacagcatcagccaaatttcagttcttaatggaggaaaagcacagtgtgcc
aaattctgcaccactggtatggatggaggcatggctatttgggatgtaaagacccttgaa
tctgcaatgaaggacctcaagattgtctag
DBGET
integrated database retrieval system
