Puntigrus tetrazona (Sumatra barb): 122333332
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Entry
122333332 CDS
T08985
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122333332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122333332
03036 Chromosome and associated proteins [BR:
ptet03036
]
122333332
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122333332
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122333332
Chromatin remodeling factors
BAF complex
122333332
PBAF complex
122333332
GBAF(ncBAF) complex
122333332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122333332
NCBI-ProteinID:
XP_043086832
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MSTPEPPLGGTPCPGPSPGPGPSPGAVLGSGLSPGSSHSMMGPSPGPATSTGLSFPPQAS
AGYSQESLHQMHKPVEENLSEDARFSQMKVVPMRAGHSGMTRPGSPMDQHSQGYPSPLGS
SEHVSSPVSASGPPSGPLLSTSGSSSASLDGVDGQTLPQQNRPGSQSAAPGSTSSSSAPT
PFNQSQLHQLRAQIMAYKMLARGQPLPEHLQMAVQGKRPMPGMPQGPSLTSLPPGGANTG
FSRGHGMVGPNMPPPGPSGVPAGVQGQNHNGPPKPWPEGPLVNAATPSNAPQKLMPPQPT
GRPSPAPPSVPPAASPVMPPQTQSPGHLAHPSQPTTMVPLHQKQNRITPVQKPCGLDPVE
ILQEREYRLEARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMR
RDTALETSLDAKAYKRNKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKD
FKEYHRSITAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKRKKKKLENAEGQTGTLGPDGE
PLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEE
DEEEEEEPPQLLPSQAPTDEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGSAVFARG
LQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQ
LRSGKFNVLITTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRV
LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRR
LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK
GKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGIVQGPDLYRASGKFEVLDR
ILPKLRASNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPAS
QYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV
NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVRSSFTHNS
HTKEEEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPKRKPRLMEEDELPTWI
MKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGTLEEIEEEVRHK
KTARKRRRDRDPDAIPSTPGARGGRERDDDGKRQKKRGRPPSEKLSPNPPSLTKKMKKIV
DAVIKYKENNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLNDLER
DVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEREEESDGEESEEDEEDEGSDSE
TRSVKVKIKLSRKDRSAERGRGRRRTARTRAKPVVSDDDTDEEQEEDRSNSASEEEQG
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccggagcccccgttaggaggcacgccctgtccggggccttctcccggcccg
ggcccgtctcccggggccgtgctggggtccggactgtcccccgggtcctcacacagcatg
atgggccccagccccggaccggccacttccacagggctctcgtttcctccacaagcgtct
gcgggatacagccaggagagcctgcaccagatgcacaagccggtggaggagaacctctca
gaagacgctcgtttcagtcagatgaaggtggttccgatgagggccggtcacagcgggatg
acccgtccagggagccccatggaccagcactcgcaaggatacccgtctccgctcggctcc
tcagagcacgtgtctagtcctgtgtccgccagcgggccgccgtccggtcctctcctgtcc
acctccggctccagctctgcttcgctggatggcgtggatggtcagactctgccgcagcag
aaccgtcctgggagccaaagcgcagccccgggctccaccagcagctcctcggctccgacg
cccttcaaccagagccagctgcaccagctgagggcacagatcatggcctataagatgctg
gctcgtggccagccgctcccagaacacctgcagatggcggtgcagggcaagcggcccatg
ccagggatgccccagggcccgtccctgaccagcctgccgcccggcggagcgaacaccggc
ttcagccgaggacatgggatggtgggacccaacatgcctcctcctggaccttctggagtc
ccggctggtgtccagggccagaaccacaacgggccgccaaaaccgtggcctgaaggtcct
ctggtcaacgcagcgacgccgtccaacgctcctcagaagctgatgccgccgcagcccacc
ggacggccctctcccgctcccccctctgtgccgccggccgcttctccggtcatgccccca
cagacgcagtctcctggacacctggcccacccgtcccagcccactaccatggtgccgctg
caccagaagcagaaccgcatcacgccggttcagaagccctgcggtctggacccggtggag
atcctgcaggagagagagtacaggctggaagctcgtatcgctcaccgtattcaggagctg
gagaatcttccaggctctctggctggagatctgcgcaccaaagccacgattgaactcaaa
gcgctccgactcctcaacttccagagacagttgcgtcaggaggtggtggtctgcatgaga
cgagacacggccttagaaacctctctggatgcaaaggcctacaagcgcaacaagagacag
tccttacgtgaggcacgaatcacagagaaactggagaagcagcagaagattgaacaggaa
cgcaaacgcaggcagaaacaccaggaatatctcaacagcatcctgcagcacgccaaagac
ttcaaggagtaccatcggtccatcaccgccaagatccagaaactgaccaaagctgtggcc
acttaccacgccaacactgagcgagagcagaagaaagagaacgagcgcatcgagaaggag
agaatgagacgcctgatggctgaggatgaggagggttaccggaagctcattgatcagaag
aaggacaagcgtctggcgtatctgctgcagcagacggacgagtatgtggctaatctgacg
gagctggtccgtgctcataaagctgttcaggccctgaaggagaagaagaagaagaagagg
aagaagaagaagctggagaatgcggagggccagacggggaccctggggcccgatggagag
cccctggatgagacgagtcagatgagtgatcttccagtgaaggtgatccacgtggacagc
gggaagattctgactggagtggacgctcctaaagctggacagttggacacatggctggag
atgaaccctggttacgaggtcgctccgcggtcagacagcgaggattctgggtcagaggag
gacgaggaagaggaagaggaacctcctcagctgctgccttcacaagctcccacagacgag
aagaagaagattcctgacccagacagtgaggacgtgtctgaagtggacgcccgtcacatt
atagagcatgccaaacaggacgtggatgatgagtacggtagcgctgtgtttgcccgcggg
ttacagtcgtattacgccgtggctcatgcggtcactgagcgagtggacaaacagtcgtct
ctgctaatcaacggtcaactcaagcaataccagatcaagggtctggagtggctggtgtct
ctctataacaacaatctgaatgggatcctggcggatgagatgggtttgggcaaaaccatc
caaaccatcgccctcatcacgtacctgatggagtacaagcgtctgaacggaccctacctc
atcatcgtcccgctctcgactctgtctaactgggtctacgagtttgataagtgggcaccg
tctgtcgtcaaagtctcgtataagggctctcctgctgctagaagagccttcgtccctcag
ctgcgcagcggcaagtttaacgtgttgatcaccacgtacgagtacatcattaaagacaag
catgtgctggccaagattcgctggaagtacatgattgtggatgaaggccatcgcatgaag
aaccatcactgtaagctgacgcaggtgctgaacacacattacctggccccgcggcgcgtg
ctgctgaccggaaccccgctgcagaacaagctcccggagctctgggccctgctcaacttc
ctgctgcccaccatcttcaagagctgcagcacgtttgagcagtggtttaacgcaccattc
gccatgaccggagagaaggtggatctgaacgaggaggagaccatcctgatcatccgccgc
ctgcacaaggtgctccgccccttcctgttgcgcaggctgaagaaggaagtggaggcgcag
ctgcctgagaaggtggagtacgtgatcaagtgtgacatgtctgcgcttcagagggtcctg
tatcgacacatgcaggccaaaggagtgctgctgaccgacggctccgagaaggacaagaag
ggtaaaggtggcactaagactctgatgaacaccatcatgcagctgaggaagatctgcaat
cacccgtacatgtttcagcagatcgaggagtcgttttctgagcacctgggcttcacggga
gggatcgttcaggggcctgatttataccgcgcctctggaaagtttgaggtgctggatcgt
attttgcccaaattacgagcgtccaaccacaaagtgctgctgttctgccaaatgacgtct
ctgatgaccataatggaggattattttgcttaccgcaactttaaatatctgcgtctggac
ggcacaactaaagcagaggaccgcgggatgctgctgaagaccttcaatgatccagcctct
cagtacttcatattcctgctgagcaccagagccggtggactgggcctcaatctgcagagc
gccgacaccgtcatcatcttcgacagcgactggaaccctcatcaggatctccaggctcag
gatcgagcgcaccgcatcggtcagcagaacgaggtgagggttctgcggctctgtaccgtc
aacagcgtcgaggagaagatcctggctgctgctaaatacaagctgaacgtggaccagaag
gtgatccaggccggcatgtttgaccagaagtcgtcgagtcacgagcgcagagcgtttctg
caggccattctggagcacgaggagcaggacgaggtcaggagttcattcactcacaacagc
cacacaaaagaggaagaggacgaggtgccggacgatgagaccgtaaatcagatgatcgct
aggagcgaggacgagtttgaccagttcatgcgcatggatctggatcgtcgccgcgaggag
gctcgtaatccgaagcgaaagcctcgtctcatggaggaggacgagctgcccacgtggatc
atgaaagacgacgcagaggtggaacgactcacatgtgaggaagaagaagagaagatgttc
ggccgtggctcgcgtcagaggaaggaggtggattacagcgactctctcacagagaaacag
tggctgaaggccatcgaggacgggaccctggaggagatcgaggaggaggtgcggcacaag
aaaacggctcggaagaggaggcgcgatcgagatcctgacgccatcccgtccactccgggc
gctcgcgggggacgagagagagacgacgacggcaagagacagaagaagcgaggtcgcccg
ccgtccgagaagctctcgcccaaccctccatcgctcaccaagaagatgaagaagatcgtg
gacgctgttatcaaatacaaggagaataacggccgtcagctgagtgaggtcttcatccag
cttccgtcacgcaaagagctgcccgagtactacgagctgatccgcaaacctgtggacttc
aggaagatcaaggagcgtatccgaagccatcgatatcgcagccttaacgacctagagaga
gacgtgatgctgctttgccagaacgctcagaccttcaacctggaggggtctctgatctat
gaggactctatcgtgctgcagtcggtgttcaccagtctgcgtcagaagatcgagagagag
gaagagagtgacggagaagagagtgaggaagatgaagaggacgaaggctctgattcagag
actcgatccgtgaaggtgaagattaaactgagccgtaaggacagaagtgcagagcgtggc
agaggacggaggagaactgcaagaacaagagccaaacctgtcgttagtgacgacgacaca
gatgaggagcaggaggaggatcgatctaacagtgccagtgaggaagagcaggggtga
DBGET
integrated database retrieval system
