Puntigrus tetrazona (Sumatra barb): 122333460
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Entry
122333460 CDS
T08985
Symbol
ush1gb
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122333460 (ush1gb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122333460 (ush1gb)
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122333460 (ush1gb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
122333460
NCBI-ProteinID:
XP_043087019
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MNDKYHRAARDGHLHLLKEATRKDLNAPDEDGMTPTLWAAHHGNLDALRLLVARGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGTNVWCLDNDYHTPLDMAASRSHMDCVRYLDTI
ASKQITINPKLVSKLKDRAFRNAEKRIKNCEKLQRKHHERMEKHFLRESAAMDTSDTMSY
SSFSSTLSRRIPQFNTLDSNMTYSQATLQSTTRGRTKIQRRLEKKKQGDGTFKISEDGRR
SIRSLSGLQLSNDVMFLKQGTYVERRQQSSPRLNIRNMFSGKQDIRPDDDDDEVDTVSRA
LSDPGLYDAAYSEISTDSGRDSLFNRPGLGTMVFRRNYVTDGLFRMGRNEGSVAGSEPVG
RVPNVRLRGRLPLRSPSLDEVSIGSSLSFQEKNLQELPWEEGDLGLEEEDDEFQPSSAPL
EVFLASQGLSDFLSIFHREQMDLDALLLCSEQDLISIHIPLGPRKKLLDACSRRNNVLDE
ADGMQDTML
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggctcgagacggccacctgcacctgctgaaggaggcg
acgcgcaaagacctgaacgcgccggatgaagatgggatgacgccgacgctctgggccgcg
caccacggcaacctggacgcgctcagactgctggtggcacgaggaggagatccagataaa
tgtgatatttggggaaacactcctcttcacctggcagcagctaatggccatctcaactgt
ctgtcctttctggtgtcatttggcaccaatgtgtggtgcttggacaatgactaccacacg
ccactggacatggcagcctctaggagccacatggactgtgtgcgatatctggacactatc
gcttccaagcagatcaccatcaaccccaaactggtgagcaagttgaaggaccgtgccttc
cgtaatgccgagaaacgcattaagaactgtgaaaaacttcagcgcaagcatcacgagcgc
atggagaagcatttcttgagagagagtgctgcaatggacacatcggatacaatgagttac
agcagtttcagcagcaccctaagtcgaaggatccctcagttcaacacccttgactccaac
atgacatactcgcaggcaacgcttcagtctacaactagaggccggacaaagattcagcgg
cgtcttgagaagaaaaagcaaggtgacggaactttcaagatatccgaagatgggcgacgg
agcattcgctcactctctggtcttcagctgagcaatgatgtcatgttcttgaagcaggga
acatatgttgagcgacgccagcagtccagccctcggctcaacatccgtaacatgttttct
ggtaaacaggacatcaggccagatgatgatgatgatgaggttgacaccgtttctagggca
ctcagtgatccaggtctgtacgatgctgcatactcggaaataagtacagattcgggtagg
gactccttgttcaaccgcccaggactcggtactatggtattccgtcggaattatgtgact
gatgggttgttccgaatgggtcggaatgaggggagtgtggcgggtagtgaaccagtggga
cgggtaccaaatgtccgcttacgtgggagattgcccctacgatctcctagtcttgatgaa
gtcagcattggcagctcattaagtttccaagagaagaacttgcaggaattgccatgggag
gaaggagacctgggtttggaggaagaggatgacgagtttcagccatcttctgcaccttta
gaagtgtttctggcatctcagggactgagtgacttcctctctatcttccatcgagagcaa
atggacctggatgcattgctgttgtgctctgagcaggacctcataagcattcacattcca
ctcggacctcgaaaaaaactactagatgcatgcagcagacgcaacaatgttctggacgaa
gctgatggcatgcaggacactatgctctaa
DBGET
integrated database retrieval system
