Puntigrus tetrazona (Sumatra barb): 122333525
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Entry
122333525 CDS
T08985
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
122333525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122333525
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
122333525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
122333525
NCBI-ProteinID:
XP_043087126
LinkDB
All DBs
Position
Unknown
AA seq
1395 aa
AA seq
DB search
MLPTEEPEDDDGDEKRLSTIMTYPPSVRNMAVIIPYTNDILCDHKGQRMWWAFLASSMVT
FFGGLFIILLWRTLKYLWTVCCHCKRKKKDVLRVSNPAVLGDGVIKAAGQRETEAAASEV
GWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSKPIESCQHFDKDYTLQ
IDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRA
LRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQP
LSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKK
YGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALF
KRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYH
PKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLF
SMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLIAIEYK
SDQRESRGGKCTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKK
CGCKRTKKPAYERMHLACCVACGGAERGCSCMSDSVASNMEVLHRGFPFSPVSLYDNKTT
LCSSKSNYNGYIKSINDELGPTFQPQNPKPVLKRAQCAARAPPAVPAVRVSVPLVNNRKG
SLLSPAALYLHRLSLAGSRELYASGAGASDASRLHRACSLPVKYRYHSSHGSSSTLLVEE
EQQSALSPKKKQRNGGMRTSPTCSPKIIRHDPLLFPGHDQMETMDENIKKYDSTGMFHWC
PSKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKPIV
FVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASL
QDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLVRQASITTGAN
IPIITELAKTDKLLPLVSLSQDKSSGNNIPMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQ
CTKRYVITNPPYDFELVPTDLIFCLMQFDHNAGQTRSNLSTQSSYCPSKKSPSAHSIPAS
ARPGRSRSRDLRDKQNASRTNRGLSDKNRYTDEPESSFPRNTQTKHTNAHTANQSAQYKP
TSSVIQPIREVEEEP
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgaagaaccagaagatgacgacggcgacgagaagcggctctccacaata
atgacctacccgccctcggttcggaacatggctgtgatcatcccctacaccaatgatata
ctctgcgaccacaaaggccagaggatgtggtgggctttcctcgcctcctccatggtcact
ttcttcgggggtctgttcatcatcctgctgtggaggaccctcaagtacctgtggacggtg
tgctgccactgcaagcgcaaaaagaaggacgtgctgcgggtcagtaacccggcggtgctc
ggtgacggtgtgattaaagcggcgggtcagcgggagacggaggcggcggccagcgaggtg
ggctggatgacctcggtgaaggactgggccggggtcatgatctctgctcagacgctcacg
ggacgtgttctggtggtgcttgtcttcgctctgagcatcggagcgcttgtgatttacttc
atcgactcctcgaaacccattgaatcctgtcaacatttcgacaaggactacaccttgcag
atcgacatggccttcaacgtgtttttcctcttgtacttcggcctgcggttcatcgcagcc
aacgacaagctgtggttctggctggaggtgaactcggtggtggatttcttcaccgtgccg
cccgtgttcgtgtccgtgtatctgaaccggagctggctgggattgaggttcttgagagcc
ttgaggctgatccagttttcagaaatattacagtttttaaatatcttaaaaacaagcaac
tccataaagttggtgaacttgtgctcaatctttataagcacgtggctgacggcagcgggc
ttcatacatctggtggaaaactcaggggatccttgggaaaacttccaaaattcccagccg
ctttcctactgggagtgtgtgtacttactcatggtaaccatgtccacagtgggttatgga
gatgtttgtgctaaaacaaccctcggccgccttttcatggtcttcttcattctcggagga
ttggccatgtttgccagctacgttcctgaaatcatagagttaataggaaaccgcaagaaa
tatggtggttcctatagtgcagtgaatgggaggaagcatatagtggtctgcggtcacatc
acgctggagagcgtctccaacttcctcaaagacttcctacacaaggacagggatgatgtc
aatgtagaaatagtttttctccataatatttcccctaatcttgagctggaagccttattc
aagagacacttcacacaggtggagttttaccagggatccgtcctcaatcctcacgatctc
gctcgagtcaagatcgagtcagccgatgcctgcctgatcttagccaataaatactgcgca
gatcccgacgctgaagatgcatccaatatcatgagggtgatatccattaaaaactaccat
ccaaagatacgaatcataacacagatgctgcagtaccacaataaggctcatcttctgaac
atcccgagctggaactggaaggagggcgatgacgctatctgcctcgccgagctgaagctg
ggcttcatcgctcagagctgcctggcccaggggctgtccaccatgctggccaacctcttc
tccatgaggtcctacatcaagattgaagaagacacctggcagaagtattatttagaggga
gtggccaatgaaatgtacaccgagtatctgtccagtgccttcgtgggtttgtctttcccc
accgtctgtgaactctgctatgtgaagctgaaactcctgctgatcgcgatcgagtataaa
tcagaccagagagaaagcaggggtggaaaatgcacactgatcaacccgggcaatcatgtg
aagatgcaggagggaactctgggcttcttcatcgccagtgacgccaaagaagtgaagagg
gcacttttctactgcaaagcttgtcacgatgacattacagacccgaaacggatcaagaag
tgtggatgcaagcggaccaagaagcctgcctacgagagaatgcatctggcatgttgtgta
gcttgcggtggggcagaacgtggctgctcgtgcatgtcagacagtgtggctagtaacatg
gaggtgctgcaccgtggcttccccttctctcccgtgtctctgtatgataacaagaccact
ttatgctcctctaaaagtaactataacggatacatcaaatcaataaacgatgagctcggt
ccaacattccagccccagaatcccaaacccgtcctaaagcgagctcagtgcgcagcgaga
gcgcctcctgctgtcccggccgtccgtgtgtccgtgcctttagtaaataaccgtaaaggc
agtctgctgtctccggccgccttatacctgcacagactcagtctggccggctctagagag
ctgtatgcgagcggcgcaggagcgtctgatgccagccgtctgcatcgggcctgtagtctg
cctgttaaatacagatatcattccagccacggctccagctccacactcttagtggaggag
gagcagcagtcggctctgtcgcccaagaaaaagcagcgtaacggagggatgagaacgtcg
cccacatgctcgcccaaaataataaggcacgacccgttgttgttccccggacacgatcaa
atggaaacgatggatgagaacataaagaaatatgattcgacgggaatgtttcactggtgt
ccgtcaaaagacatagagaaggtcatcctgactcgcagcgaggcggccatgacggttctg
agcggtcacgtggtggtctgtatattcggcgatgtgaagtcggctctgatcggtctgcgt
aacctggtgatgcctctgagagccagtaacttccactatcacgagctgaagcccatcgtc
ttcgtgggatctctggagtatctgaagagagagtgggagacgctacacaacttccccaaa
gtctccatcttacccggaacgccgctgagtcgggccgatctgagagcggtcaacatcaac
ctctgtgacatgtgcgtcattctgtcggccaatcagaacaacatcgacgacgcctctctg
caggacaaggagtgtattctggcgtcgctcaacatcaagtccatgcagtttgacgacagc
attggactcctgcaggccaactctcaaggcttcactcctccgggcatggatcgctcgtct
ccggagaacagtcccgttcacggattggtgcgacaggcgtctataaccacgggagcaaac
attcccatcatcaccgagctcgctaaaacagacaagctgctgcccctggtttctctgagc
caggacaagagcagcgggaacaacatcccaatgataacggagctggtgaacgactcaaac
gtccagtttctggaccaggacgatgacgacgaccccgacacggagctgtacctcacccag
cccttcgcctgcgggacagcgttcgccgtcagcgtgctggattcattaatgagtgccacg
tacttcaatgataacatcctgaccctgatccggacgctggtgaccggcggagccacgccg
gagctggagggtcttctggcggaggagaacgctctgcgcgggggatacagcacaccgcag
acgctggccaacagagaccgctgccgggtcgctcagctggcgctttacgacgggcccttc
gctgacctcggggatggaggctgttacggagatttattctgtaaagcgctgaagacgtac
aacatgctgtgttttgggatctaccgattaagagacgctcatctgggagcacccagtcag
tgcaccaaacgatacgtgatcacgaatcccccgtacgacttcgagctggtgcctacagac
ctgatcttctgcctgatgcagtttgaccacaacgccggccagacgcgctccaacctgtcc
actcagtccagctactgcccgagcaagaagagcccgtccgcccactccatccccgcctcc
gcccggccgggccgcagccggagccgggacctgcgcgacaaacagaatgcgtccaggacg
aatagagggctttcagataaaaaccggtacacagacgaacctgagagcagcttccctaga
aacacgcaaaccaaacacaccaacgcacacacagccaatcagagcgctcagtacaaaccc
accagcagcgtcatccagccaatcagagaagtggaggaggagccttga
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