Puntigrus tetrazona (Sumatra barb): 122333596
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Entry
122333596 CDS
T08985
Symbol
spata5
Name
(RefSeq) LOW QUALITY PROTEIN: ATPase family protein 2 homolog
KO
K14575
AAA family ATPase
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122333596 (spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122333596 (spata5)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122333596 (spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
RNA_helicase
Mg_chelatase
NPHP3_N
AAA_28
AAA_33
AAA_7
nSTAND3
Rad17
AAA_3
Parvo_NS1
ATPase
bpMoxR
AAA_18
CDC48_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122333596
NCBI-ProteinID:
XP_043087225
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MSSSKGKGRGKKRPSEGEGERSLSEEPDSSGALTVTDFTDRAEDKAPQRWRSYLAQMSVN
TMKTLNICIGRPVLITSSTRQQQVCVAWPAAQFPSRRVGLQFSVQSGLRVRSGSVVSLQP
ITGAVLQAEHLQLTLSPEDKLLNTEEFRNYLLRTLDGRVLLPGGSVCVSYFGRQCVLAVD
SVTGVDGQTLRRSDTVSVDLASRLEELSIQQSTPERPHDPSPLTPGRSHDPSTPTPGRSH
DPSTPTPGRSHQTXPLTSDPGRSHDPSPLTPCEVSFTDASLLEGSGRSSTDTFYCVSSSS
TLSLCDPSEPEEVEEGSKVTYSMIGGLSGQLQVIRETIELPLKHPELFRNYGIPPPRGLL
LYGPPGTGKTMIGRAVANEVGAHMSVINGPEIMSKFYGETEARLRQIFTQASQRQPAIIF
IDELDALCPRREGAQNEVEKRVVASLLTLMDGIGSEGHSGQLLVLGATNRPHALDPALRR
PGRFDKELEIGADGRLEILQKQLRSVPCSVSADDQREIADAAHGYVGADLTAVCKEAGLH
ALRRVLGSEPALSDREVMNSVKVTTSDLRLAMTEVKPSAMREVAIDVPKVRWSDIGGMEE
VKLALKQAVEWPLRHPEAFLRLGITPPKGVLLYGPPGCSKTMIAKALANESQLNFLSIKG
PELLSKYVGESERALREVFRKARTVAPSIVFFDEIDALAAARGSSGQSGGVADRVLAQLL
TEMDGIEQLKDVTVLAATNRPDMIDKALMRPGRLDRVIFVPLPDADTRREIFTLQFRSMP
IHPSVHLEDLVTRTEQYSGAEITAVCREAALQALQENISAEHVSAGHFSSALTAVRPRVP
HTLLKIYSSYQQNLTHTQ
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagcaaaggaaaaggcagagggaagaagagaccgagtgaaggagaaggagag
cggtcgctcagcgaggagccggactccagcggggctctgaccgtcacggacttcacagac
agagctgaagataaagcccctcagcgatggcggtcatatctggctcagatgagtgtgaac
accatgaagactctgaacatctgcatcggacgacctgtcctgatcaccagcagcacacga
cagcagcaggtgtgtgtggcgtggccggcggctcagtttcccagcaggcgtgtgggtctt
cagttcagtgttcagtccggtctgagggtgaggtcagggtcagtggtcagtctgcagccg
atcaccggagccgttcttcaggccgaacacctgcagctgaccctcagtcctgaagacaaa
ctgctgaatacggaggagttcaggaactatcttctgcggacgctggacggccgggttctt
cttccgggcggctcggtgtgcgtctcgtatttcgggcgtcagtgtgttctggccgtggat
tcggtgacgggcgtcgacggtcagactctgagacgctcggacacggtctctgtcgatctc
gcctcgcgactggaggagctgtccatccagcagagcacacctgagcgaccacatgacccc
tcacctctgaccccgggtcggtcacatgacccctcaaccccgaccccgggtcgatcacat
gacccctcaaccccgaccccgggtcgatcacatcaaacatgacccctcacctctgacccg
ggtcgatcacacgacccctcacccctgaccccgtgtgaggtgtccttcacagacgcttct
ctgttggaggggtctggacgctcgtccacggacaccttctactgtgtttctagttcttct
acgctgagtctatgtgaccccagcgagccggaggaggtagaggaggggtcaaaggtcacg
tacagtatgatcggcggcctcagcggtcagctgcaggtcatccgggagaccatcgagctg
ccgctcaaacacccggagctcttcaggaactatgggatcccgccccctcgagggctgctg
ctgtatgggccgcccggcacggggaagaccatgattggacgagccgtagccaatgaagtg
ggagctcacatgagcgtcatcaacggccccgagatcatgagcaagttttatggagaaact
gaagcaagattaagacagattttcacacaggcctcacagaggcagcctgccatcatcttc
atcgatgagttagacgctctgtgtccgaggagagaaggagctcagaacgaggtggagaag
cgtgtggtggcgtcgctgctgactctgatggacgggatcggatcggagggtcacagcggt
cagctgctggttctgggagccactaatcgtcctcatgctctggacccggctctgagacga
cccggccgcttcgataaggagctggagatcggcgcagacggccgccttgagatcctgcag
aagcagctgcgctccgtgccgtgttcggtcagcgccgatgaccagcgggagatcgccgac
gcagcacacggatacgtgggagctgacctcaccgccgtctgcaaagaagctggtcttcac
gcactgaggagggttttaggatccgaacccgctctctctgatagggaggtgatgaacagc
gtaaaggtcacgacctctgacctgaggctggccatgaccgaggtcaaacccagcgcaatg
agagaagtggccatcgacgtgcccaaggttcggtggagtgacatcggtgggatggaggag
gtgaagctggccctgaagcaggcggtcgagtggcccctgcggcacccagaggccttcctc
aggctggggataacgccacctaaaggtgtgctgctgtacggacccccgggatgctccaaa
accatgatcgctaaagcactagccaacgagagccagctcaacttcctgtctatcaagggt
ccggagctgctgagtaaatacgtgggagaatccgagcgagcgctccgagaggttttccgg
aaggctagaacagtggctccatctatcgttttcttcgatgagatcgacgctttagcagct
gcgcgaggaagctctggtcagtcgggcggcgtcgctgaccgagtgctggctcagctgctg
accgagatggacggaatcgagcagcttaaagacgtcacggttctcgccgcaaccaaccga
cctgatatgattgacaaggctctgatgcgtcccggccgtctggaccgtgttattttcgtg
ccgctgccagacgcagacacccgcagggagatcttcacgctgcagttcaggagcatgccc
atccatcccagcgtgcacctggaggacctggtgacccggacggagcagtactccggggca
gagatcacggccgtgtgcagagaagcggctctacaggcgctgcaggagaacatctcggct
gaacacgtgagcgccggacacttctccagcgcgctgaccgccgtcagaccccgcgtccct
cacacactcctgaagatctacagcagctaccagcagaacctgacacacactcagtaa
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