Puntigrus tetrazona (Sumatra barb): 122333974
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Entry
122333974 CDS
T08985
Symbol
col28a1b
Name
(RefSeq) LOW QUALITY PROTEIN: collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122333974 (col28a1b)
Peptidases and inhibitors [BR:
ptet01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
122333974 (col28a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
122333974
NCBI-ProteinID:
XP_043087769
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MQHGQRLFLCLLLWLLVPAARCQNRRQSGETLNLTTKQDNELVCTLEIAFILDSSESAKG
LLFDREKAFVRSFSKRVAQMQVSDWHLKTRMALIYYSSSVHIDQHFRNWQDLDVFLGRLE
DAIYIGQGTYSTYAISNATQLFASETKEQSVRVALLMTDGVDHPRNPDIMMAVAEAKGHN
IKIFTIGLSNLAKDNVNSAKLRVVASSPAQQYFHSLTDPKLEERLLQQLERIAKNECPRP
PVCLCEKGDRGPPGAPGKSGEQGYEGAPGQKGSRGETGAPGLPGISGPEGRPGFKGDKGD
QGNCGPPGQKGHKGTEGLPGPRGPRGEQGLKGPPGDQGHEGTAGPKGDRGPIGASGPPGD
IGVGFPGPKGDKGNPGRAGLPGQVGVGQPGQLGPPGLPGAQGNPGAPGEGLPGPKGDRGY
VGATGGRGPPGYGIKGEKGDAGPPGSPGPLGMPGRGIQGEKGNQGPAGPTGQRGNPGIGL
AGPKGEQGFPGERGVPGERAIGEPGPKGEPGLRGLPGEAGVPGEDGAMGPKGDIGLPGPK
GQDGPPGRGLPGEKGAGSRGQPGPFGPVGPAGSKGEPGNVGVQGVTGPPGRGIPGPKGDP
GPVGPPGPTGEPGIGIAGPKGELGLRGPVGPPGLKGDGYLGPPGPPGLPGPTGESGPXGT
GLPGPKGDRGPPGSPGPAGAPGLGQVGQKGSIGQNGPAGPPGLPGEGMQGPKGDPGYQGL
QGPRGFPGEGLPGQKGSRGLTGAQGRKGDRGGQGEPGFTGPPGNTGTKGEAGLTREEIIS
LIRSICGCGRICRIHPLELVFVIDSSESVGPENFEVIKDFVNTMIDRSSVSPEVTRVGVV
LYSHINLVVTSIQERLSRDEVKAAVRRMPYIGEGTYTGSGIRKANEIFRFARRGVRKVAV
VITDGQTDHRDTVKLEDAVREAHSANITMLVIGVVNQSDPIYDDFKHELKSIASPPTEEH
VFSIEDFRMLSEVESKLLQKICENIDGSIFSTTSKPGAVGEVFPYYDPKPGGPNVLSTLA
PYLEREELNLLPDFSLTSLERPKPDADRTETPLLIQDDFTADEGCLQPLDPGPCREYVVK
WYFDPKANSCAQFWFGGCHGNRNQFGSQEACKKSCVKM
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatggccaaaggctttttctgtgcctgctgctttggctgcttgtaccagcggcc
agatgccagaacagaagacagtctggagaaactctgaacctcaccacaaaacaggacaat
gagttagtatgcactctagagatcgcgttcatcctggacagctcagagagcgcgaagggc
cttctgttcgaccgagagaaagcgttcgtgcgttccttcagcaagcgcgtggcccagatg
caggtgtctgactggcatctgaaaacccgtatggcgctcatctactacagcagctcggtc
cacatcgaccagcacttcagaaactggcaggaccttgacgtcttcctgggccgactggag
gacgccatctacatcggccagggaacgtactccacgtacgccatatccaacgccactcaa
ctcttcgccagcgagaccaaggagcaaagcgtgagggtcgccctgctcatgaccgacggc
gtcgaccacccgcgcaatcccgacatcatgatggcggtcgccgaggccaaaggccacaac
ataaagatcttcacaatcggcttatcgaacttggcaaaggacaacgtgaacagcgccaaa
ctgcgggtcgtagcgagcagcccggcgcagcagtacttccacagcctcactgaccccaaa
ctagaggaacggctcctgcagcagctcgaaagaattgcgaagaatgaatgtcctcggcca
ccggtgtgtttgtgtgagaaaggtgatcgcggtcctccaggagctcctggcaaaagtgga
gagcaaggttatgaaggagcaccgggtcaaaaaggctcaaggggggaaacgggagcaccc
ggtctgccaggaatcagcggcccagagggaagacctgggttcaaaggtgataagggggat
caaggtaactgtggaccaccgggacaaaagggacataagggcaccgaagggcttccaggg
ccaaggggccccagaggagagcagggtctgaaagggcctccaggagaccagggtcatgag
ggtacagctggacctaaaggtgatcgagggccgattggtgcatctggcccaccgggagat
attggagtcggatttcctggtccgaagggagacaaagggaacccgggaagagcaggtctt
cctggtcaggtcggcgtaggtcagcctggacaacttggtcctccaggtttaccaggagca
caggggaacccaggagctccaggtgaaggtcttcctgggcccaagggtgaccgtggctat
gtcggtgctacaggtggacgtggacccccaggttatggaattaaaggtgaaaagggcgac
gcaggacctcctggatcacctggaccattaggaatgcctggcagggggattcaaggagag
aaagggaatcagggaccagctggccctactggtcaaagagggaatcctgggataggactc
gctgggccaaagggagaacagggcttccctggagaacgtggagtccctggagaaagagca
atcggagaaccaggacccaaaggtgaacctggattacgaggtttaccaggtgaggcaggt
gtaccaggagaagatggagccatggggccaaagggtgatataggcttaccaggacccaaa
gggcaagacggacctcctggaagaggcctgcctggagagaagggagcgggctccagaggc
caaccaggaccttttggaccagttgggccagcagggtcaaagggggaaccaggcaatgtt
ggagttcaaggtgttactgggcccccaggaaggggcataccgggacctaagggcgatcca
gggccagtcggtccaccaggtcccactggagaaccagggataggcattgcagggccgaag
ggtgaattagggttacgaggacccgttggacctccagggctgaagggagatggctatctc
ggcccacctgggccaccgggtctgccaggtcctacaggagagtctgggccatagggaaca
ggtttacctggaccaaagggggatagaggccctccaggttccccagggcctgctggagca
ccaggtcttgggcaagtgggccaaaagggctccattggtcagaatggtccagctggtcct
ccaggattaccaggagagggcatgcaaggaccaaagggtgatcctggatatcagggttta
caggggccaagagggtttcctggagagggtctgccggggcagaaggggagtcgtgggtta
accggagcacaaggacgtaaaggagacagaggaggccagggagaaccaggatttacagga
ccaccgggtaatacaggaacaaaaggagaagctggtctcacgagagaggaaataatcagc
ttaatccgatctatttgtggctgtggccggatttgcagaatacatcctctggagctggtg
tttgtgatcgacagctccgagagcgtcggcccggaaaatttcgaggtcattaaagacttt
gtgaacaccatgatcgaccgctcgtccgtcagtcccgaggtcacgagagtcggcgtggtt
ctctacagccacattaacctggtggtcacaagcattcaagagcgtttgagccgcgatgaa
gtgaaagcagccgtgcgcaggatgccctacattggggagggcacttacacaggaagcggc
atcagaaaagccaatgagatcttccggttcgctcggcgtggtgtgaggaaagtggctgtg
gtcattactgacggccagacggatcaccgggacacggtgaagctggaggatgcggtcaga
gaggcccattcggccaatatcactatgctggttataggagtggtgaatcaaagcgacccc
atctatgatgattttaaacacgagctgaagtcaatagcatcgccgcccaccgaagagcac
gtgttttccatcgaggacttcagaatgctttctgaagtggaaagtaaactgctccagaag
atctgtgagaacattgatggatcgatattcagcactacctccaagccaggtgcagttgga
gaggtgttcccgtactacgatcccaaaccaggcggccccaacgttctcagcactttagca
ccgtatctagaaagagaggaactgaacctcctcccagatttctctctcacgtcactggag
cggcccaaaccggacgcggacaggacagaaacgccgctgctcatacaggatgacttcact
gcagacgagggatgcctacagcctctggatcccgggccgtgccgagagtacgttgttaaa
tggtatttcgatccgaaagccaattcgtgtgctcagttctggtttggaggttgccacggc
aacagaaaccagttcgggagtcaagaggcctgcaaaaaatcctgtgtgaaaatgtaa
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