Puntigrus tetrazona (Sumatra barb): 122334058
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Entry
122334058 CDS
T08985
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122334058 (sox2)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122334058 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122334058
NCBI-ProteinID:
XP_043087898
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcccccggcgcctcagccgaacacggggggc
acggggaacaccaactcttcgggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgacgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaatacagaccccggaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggagggctcctggcgccgggcggcaacgccatgggcgccggtgtg
ggcgtaggggccggtttgggcgccggggtcaaccagaggatggacagctatgcccacatg
aacggctggaccaacgggggctacggcatgatgcaggagcagctgggttacccgcagcac
ccggggctgaacgcgcacaacacggcgcagatgcagcccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctattcgcagcaaagcacgccgggaatgacgctgggctccatgggctcggtg
gtcaagtccgagtccagctcgagtccgccggtggtcacgtcgtcctctcactcccgcgcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcccggcgcggag
gtccaggaccagagcgcgcagagcagactgcacatgtcccaacactaccagagcgcgccg
gtgcccggcacgacgattaacggcacgattcccttatcgcacatgtag
DBGET
integrated database retrieval system
