Puntigrus tetrazona (Sumatra barb): 122334299
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Entry
122334299 CDS
T08985
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122334299 (ddx27)
03009 Ribosome biogenesis [BR:
ptet03009
]
122334299 (ddx27)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122334299 (ddx27)
Spliceosome [BR:
ptet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122334299 (ddx27)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-60S particles
Helicases
122334299 (ddx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Zip
Motif
Other DBs
NCBI-GeneID:
122334299
NCBI-ProteinID:
XP_043088022
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MFADLDLIRTIDDNDEVPEDPDSESDDEAEQPIVLSKEKRALKGRGAGDFSADFEFGERD
GLYSEDWAMADVMAQLKKRKAPTTLDEKIEKVRKKRKIEEKTQKESKKTEASASKPENGE
EDEEAETEEEEDGDDEEDEEVDEDEFSSGDEKVLKKADTLREKQKKGKRKAAEAPEEFFE
DASRFDENLTFQDMNLSRPLLKAITTMGFKQPTPIQKACVPVGLLGKDVCACAATGTGKT
AAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHSVARQLAQFTTISTCLAVGGLDL
KSQEAALRAGPDILIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEII
RMCSYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGD
REAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLKRF
KDEQIDVLVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGE
TERKMLKEIVKQAKTTVKARVVPQEVILKFRDLIEKLEKDVYAVLRLEREEKEMAHSEAQ
VCVLQTCVRKKDRMAKVLQDFDLALRGKKKRAQFLKEGKKKELTVRWFHQALFFCLVYVC
VCAKRDRKQKRVRAIPEEEPVKKVSKDKGGKKKSVFDKELTNTSKKTLKQYRAGPSFEDR
KRLGVQSKKGGRFKSKSRYSRK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagatctggatctgatcagaactatcgatgataatgatgaagttcccgaggat
ccggactcggagtccgacgatgaagccgagcagcccatcgtgttgagcaaggagaagcgc
gctctgaagggccgaggcgccggagacttcagcgcagattttgagttcggcgagcgagat
ggactttacagcgaggactgggccatggcggacgtgatggcgcagctcaagaagaggaaa
gcacctactactttggatgaaaagatcgagaaagtgcgtaaaaagcgcaagattgaggaa
aaaactcaaaaagaaagcaagaaaacggaagcttcggcgtctaaaccagaaaacggcgaa
gaggatgaagaggctgagacggaggaggaggaggatggagatgatgaagaggacgaagag
gtggatgaagacgagttctcatcaggagatgagaaggtgctcaaaaaagcagacactttg
agagaaaaacagaagaaaggcaagaggaaagcagccgaagctcccgaagagttctttgaa
gacgcctcgcggtttgatgagaacctgaccttccaggacatgaatctgtccagaccttta
ctgaaggccatcaccacgatgggctttaagcagcccactcccatccagaaagcctgcgtt
cccgtggggctgctgggaaaagacgtgtgtgcgtgcgcagcgaccggcaccggtaagacg
gcggccttcatgctgcccgtcctggagcgtctgatctacaagccgagggagacgcaggtg
acccgtgtgctggttctggtgccgaccagagagctgggcatccaggtgcacagcgtcgcc
cgtcagctggctcagttcaccaccatcagcacctgcctggccgtgggcggactggacctg
aagtctcaggaggcggcgctgagagcgggtccggacatcttgatcgccacaccgggacgc
ctgatcgaccatctccacaacacgccctcgtttgagctcagtcagatcgagatcctcatc
ttggacgaggccgaccggatgctggacgagtacttcgaggagcagatgaaggagatcatc
aggatgtgctcctatcagagacagaccatgctgttctcagccaccatgagcgaggaggtg
aaggatctggcgtctgtgtctctgaagcagccggtgaggatctttgtgaacagtaacaca
gatgtggcgccgtatctcagacaagagtttgtgaggatcagacccaataaagaaggagac
agagaggctattgtcgcagctctcctgaccagaacgtttcaggatcacgtgatgctcttc
actcagacgaagaagcaggctcaccgcatgcacatcctgctgggcctgatggggttaaag
gtcggcgagcttcacgggaacctgtctcagacgcagaggttggagagtctgaagcgcttc
aaggacgagcagatcgacgttctggtggctacggacgtggccgccagaggtctggacatc
gagggagtcaaaacggtgataaacttcaccatgcccaacaccgtcaagcattacgtgcac
agagtgggccggacagctcgagccgggaaggtggggcgctccgtgtctctcgtgggcgag
accgagaggaagatgctgaaggagatcgttaaacaagccaagacgaccgtcaaagctcga
gtcgttcctcaagaggtcatcctgaagtttcgggacctgatcgagaagctggagaaggac
gtgtatgccgtgctgcgcttggagagggaggagaaggaaatggctcattcggaggcgcag
gtctgtgtgcttcaaacatgtgtgagaaagaaagatcgcatggcaaaagtgctgcaggat
tttgatttggctctgagaggaaagaagaaacgtgcacagttcctgaaagagggaaagaag
aaagagttaacggtgagatggtttcatcaagctctcttcttttgcctggtgtatgtgtgt
gtgtgcgccaaacgtgaccgcaagcagaagagagtccgagccattcctgaagaagagccc
gtgaagaaagtttccaaagacaagggcggcaaaaagaagtcggtgttcgataaggagctc
acgaacaccagcaagaaaactctgaagcagtacagagccgggccgtccttcgaggacagg
aagagactcggcgttcaaagcaagaagggaggacgcttcaagtccaagtctaggtacagc
agaaagtga
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