Puntigrus tetrazona (Sumatra barb): 122334462
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Entry
122334462 CDS
T08985
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1
KO
K10348
LRR-repeat protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122334462 (lrr1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122334462 (lrr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_9
TMEM213
Motif
Other DBs
NCBI-GeneID:
122334462
NCBI-ProteinID:
XP_043088339
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MKLQCDVEVVNRLLPSMGVRSKGRSSRAVLSIGKHVDRSLYLLVCTAKDRGGAKYKLKEN
IEKFFTWFVEEGKATVRLKEPAIDICLSKADSSSLKSFLSAARLAHRGSDTDSLPLSSLG
PVRARDVEKPKKKLSILSRKDYPLASSFPYSLEQLQVSYCRLTRVDLRMLSLRALRRLDL
SNNHIKKLPSTIGDLSCLAELILHNNHLESFGDGLCSSSLQTSLQHLDLSQNQLQVLPAR
FCQLQQLVNLKLDQNKLLRLPFHMGRLSKLRFLSAAHNQLTVLPSSFRKLCLENLDLFGN
PFIQANALEHTIRLTFPLKLQELASRAVVELRIPHGPDCVPLHLCHELDFSKSCSCGRAC
VDSYIQTAVSINLHLVSHTVVLVDNMGGTEAPVQKHFCSLLCYCEFMDGCLQRDLR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcagtgtgatgtggaggttgtgaaccggttgttaccgtcgatgggtgtgagg
agcaaaggccggtccagccgcgcggttctgtccatcgggaagcacgtggaccggagcctg
tatctgctggtctgcaccgccaaagaccgcggcggagccaaatacaagctgaaggagaac
atcgagaagttctttacctggttcgtggaagagggcaaagccacggttcggctgaaggaa
cctgcgattgacatctgtctgagtaaagccgacagcagcagcttgaagagcttcctctcc
gctgctcggctcgctcacagaggaagtgacacggactctctcccgctgtcgtctctcggc
ccggtccgcgcccgcgatgtggagaaacccaagaagaagctcagcattctgtccaggaag
gactatccgctggcatccagcttcccgtactccttggagcagctgcaggtctcgtactgc
agactgacccgagtggacctgcgcatgctgtccctgcgagcgctgcgccggctcgacctc
agcaacaaccacatcaagaagctgccctccaccatcggagacctgagctgccttgccgag
ctcattctgcacaacaaccacctggagagctttggagacggcctgtgttcctccagcctc
cagacgtcgctgcagcacctggacctgagtcagaaccagctgcaggttctgcccgctcgc
ttctgtcagctgcagcagctggtcaacctcaagctggaccagaacaagctcctgcggctg
cctttccacatgggacgcctctccaagctgcgcttcctgtctgccgctcacaaccagctc
actgtgcttccctccagcttcaggaagctgtgcctggagaacctggacctatttggaaac
ccgttcattcaagccaacgctctggagcacacgatccggctcacgttcccactgaagctg
caggagctagcgtcccgcgccgtggtggagctcagaatccctcacggccctgactgcgtc
ccgctgcatctgtgtcacgagctggacttctccaaatcctgctcctgcggccgggcctgt
gtggactcctacatccagacggcggtcagcatcaacctgcacctggtgtctcacaccgtg
gtcttagtggacaacatgggcggcacggaggctccggtgcagaagcacttctgctctctc
ctgtgttactgcgagttcatggacggctgcctgcagcgcgacctcagatga
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