Puntigrus tetrazona (Sumatra barb): 122334538
Help
Entry
122334538 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: nephronectin
KO
K06824
nephronectin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04512
ECM-receptor interaction
ptet04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122334538
04518 Integrin signaling
122334538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAM
cEGF
EGF_CA
FXa_inhibition
EGF_3
EGF_PEAR1L
EGF_DL_JAG
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
122334538
NCBI-ProteinID:
XP_043088466
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MDVTLFFSLCVCVCAASETLRSSRSLPSDGSCRYGWTRTLKGQCKPVCEWGCKHGECVGP
DQCLCRTGFTGKTCNRDVNECAFRPCKYRCMNTLGSYKCYCLNGFMMTSDGVCHDARTCA
MANCQYGCAVMKGEVRCQCPSPGLKLAPDGRTCVDVDECVTGQASCPRLRKCVNTFGSYV
CRCHEGFELRHINGKYSCTDKRFSSICYDKPGHKKCKCTPSVNGKGYDCKSVFKVTIEPA
RPVEVTVSLTTISTATTPVTTHRETTAAATTSATPPPAVTIATSVPESTAMTTVPLDYRC
YSNDNQSYNYNNKSHNDSCYHSPHNRCYDHKSNPSADIICPDDYRHASNNSLLRNQHRPT
DELDSTLDNRVHRETTAKPRGDVHIPRFENNLFDWDFDVEPGNTEEFSRDDPAAAAESCS
FDEGLCVWMTDSEGDLRWEVKDDPAGGRYLSVPETTKRSVKGARLTVALAPPTKPWRGGD
LCLSFRHRLHGHHIGSLQVFVRKGRSHNPSIWTRTGGYGWRHAQITLLGRGLLDIVLKAE
RRRGKHGEISVDDFTLRRGACSDQHHRTE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgacgctgttcttctctctctgtgtgtgtgtttgcgcggcttcagaaacactc
cggtcttcgagatcgcttccgtccgacggatcgtgtcgatatggatggacgagaacctta
aagggtcaatgcaaaccggtgtgtgagtggggctgtaaacacggcgagtgtgtcggacct
gatcagtgcctttgtcggacaggattcaccggcaagacctgcaaccgagatgtgaacgag
tgtgcgttcaggccgtgtaagtacaggtgtatgaacactctgggcagttataagtgttac
tgtctgaacggcttcatgatgacatcagacggtgtgtgtcatgatgctcgtacgtgtgcg
atggctaactgtcagtacggctgtgcggtgatgaaaggtgaggtcaggtgtcagtgtcca
tctccaggactgaaactcgctcctgacggcaggacctgtgttgatgtggacgagtgtgtg
acgggccaggcctcgtgtccgaggcttcggaagtgtgtgaacacgttcggcagctacgtc
tgtagatgtcacgaaggctttgagctgcggcacatcaacggaaagtacagctgcacagat
aaaaggttttcatctatttgctatgacaagcccggacacaagaaatgtaaatgcaccccg
agtgttaatggaaagggttacgactgtaaatctgtttttaaggtcaccattgagcctgcg
aggccagtcgaagtcacagtcagcctgacaactatctccacggcaacaactcctgtgacg
acacacagagaaacaacagccgcggcgacaacctcagccactcccccgcctgccgttacc
atagcgacttctgttccggaaagcacagccatgacgacagtaccgctcgactaccgttgc
tatagcaacgacaaccaaagctacaactacaacaacaaaagccacaacgacagctgctac
cacagccctcacaaccgttgctatgaccacaagtccaaccccagcgctgacatcatctgc
cccgacgactacagacacgcctccaacaacagcctccttcgaaaccagcacaggcccaca
gatgagctcgactcaacgctagacaaccgcgttcaccgcgagaccacggccaaaccacga
ggagacgttcacattccacgtttcgagaacaacctgtttgactgggactttgacgttgag
ccgggaaacactgaggagttctcacgagatgatccagccgccgctgctgagagctgctcg
tttgatgagggtctgtgtgtctggatgacggactcagaaggagatctgagatgggaagtc
aaagacgaccctgctggtgggcggtacctgtcagttcctgagactacaaaacggagcgtc
aaaggggcgcggcttactgtggcgctggctcctcccacaaagccgtggcggggcggagac
ctctgtctgtcgttcagacaccgtctccatggacaccacatcggctctctccaggtgttc
gtcaggaaggggcggagtcacaacccgtccatctggacgaggactggaggatacggctgg
agacacgcccagatcacacttctggggcggggcctgcttgatattgtgctaaaggcagag
agacggcgaggaaaacatggagaaatctctgtggatgactttactctgagacgaggagcc
tgcagcgaccaacaccacaggacagagtga
DBGET
integrated database retrieval system
