KEGG   Puntigrus tetrazona (Sumatra barb): 122335215
Entry
122335215         CDS       T08985                                 
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42
  KO
K14321  nucleoporin-like protein 2
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122335215 (nup42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptet03019]
    122335215 (nup42)
Messenger RNA biogenesis [BR:ptet03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122335215 (nup42)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH_4 zf-CCCH zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 122335215
NCBI-ProteinID: XP_043088961
LinkDB
Position
Unknown
AA seq 373 aa
MTVCNFFLEGRCRYGEKCWNEHPRDGRGGDYRGNQQPNRGGFGNRVWVNPAQRSAGDYVQ
PSSFSRGGNNDWSRGGGGGGGGGAAPQGIKSSDFSFSQNRFSALSSHTPAEKDRGQSSAD
DVDTIQKDMEIWQTSGQWPFSCYSALKGRISGFVEVSPEELRLEYYTGRASGDLQAYMNS
VQQLVGQWSSRVQELRVMSGSTRISVVSELNSPSSPAHGFGSAVSGFGDTSSSSSGFGAA
GFGSGSQSSSTFSFAPSKAAFGSDSQHASGFGSAAFSQASPGFGAPAPQAAASFSFAPQA
AESKAGPAAFSFKPSSGGLGTGFGSSAPAGPPADGLFTAHTDLTAEELKEFTAKRFTLGQ
IPLKPPPADLLVV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgacggtgtgtaacttctttcttgaaggtcgctgtagatacggagaaaagtgctggaat
gaacacccgagagacggaagaggaggagattacagaggaaaccagcagcccaacagagga
ggttttgggaaccgtgtgtgggtgaacccggctcagcgctccgccggcgactatgtccag
ccgtcctcgttctctcgcggcgggaacaacgactggagccgaggaggaggaggaggagga
ggaggaggagcagcgccgcagggcatcaagagctcagacttcagcttcagccagaacaga
ttctcggcgctctcctcacacactccggcggagaaggaccgaggacagagctcagccgac
gacgtggatacgatccagaaggacatggagatctggcagacgtcgggccagtggccgttc
tcctgttattctgctctcaaaggccggatctcggggtttgtggaggtgtctcccgaggag
ctgaggctggagtattacacgggccgagcgtccggtgacttacaggcttacatgaactct
gttcagcagctggtcggtcagtggagcagcagagtccaggagctgcgggtcatgagcggc
tccacccggatcagtgtggtctcggagctcaatagccccagctcaccggcgcatggcttc
ggctcggcggtgtcagggttcggagacacgtcttcgtcgtcgtctggttttggagccgca
ggcttcggttctggttcacagagcagcagcaccttcagctttgctccgtctaaagcggcc
ttcgggtcagattcccagcatgcctctgggttcgggagcgccgcgttctctcaggcgtcg
ccgggcttcggcgctccggctcctcaggccgcagcctccttttccttcgctccccaggcc
gcagaaagcaaagccggccccgcggcgttcagcttcaagccgtcctcggggggtctgggc
accgggttcgggtcgtcggcgccggccggtcctcccgcagacggcctgttcacggctcac
actgatctgaccgctgaagagctgaaggagttcacagccaagcgcttcacgctgggacag
atccctctcaaaccaccgcctgccgacctcctcgtggtctga

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