Puntigrus tetrazona (Sumatra barb): 122335369
Help
Entry
122335369 CDS
T08985
Symbol
ssrp1a
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122335369 (ssrp1a)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122335369 (ssrp1a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
122335369 (ssrp1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
122335369 (ssrp1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
DUF4152
Motif
Other DBs
NCBI-GeneID:
122335369
NCBI-ProteinID:
XP_043089132
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MGDTLEFNDIHTEVKGSWNDGRLRFSKQSVVYKSHKTGKVDSIPAPELSAAQWRRVCVGH
GIKLATSTGHVYRYDGFKDTDFEKISXVFKTNYKVELAEKDMCVKGWNWGTAKFSGSLLS
FDVNDSPVFEIPLSSVSQCAXGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVXFKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTLDYKIPYTTV
LRLFLLPXKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEELSLALNMSEDEVEKRYD
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKGELGLLYPLERGF
IYVHKPPVHLRRGDLLRANFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYDKLFRLAN
AKKLNIKNRGLKRSRRLADSDEDQHDAYXERMKQEGKIREEGDGSDESEGDSDESFNPGE
EDDDAPEEYDSNASESDSEADDGDSEEESRKKKPEKKPKKVVKEKKERKPRKEKKVKDAL
CSQEADERYMLWLNGNRELIKSENPGISVTEISKKAGEMWKQLSKDRKEEWDKKAEEAKK
QYXRAMKEYRESGGESGACCQRKKKKKGGKVEPKKKSGGEKEKKKEGGNESFKSKEFISS
ERELV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagttcaatgacattcacacagaggtgaagggatcgtggaacgat
ggccgtctgaggttcagcaagcagtctgtggtctacaaaagccacaaaacggggaaggtg
gacagcatcccggcccccgagctctccgcggcccagtggcgtcgtgtgtgtgtggggcac
gggatcaaactggccaccagcaccggacacgtctacagatacgacggcttcaaggacacg
gattttgagaaaatctcanacgtttttaaaacaaactacaaggttgagttggcggagaaa
gatatgtgtgtgaagggctggaactggggcactgccaaattctcagggtctctgctgtcg
tttgatgtgaacgacagtcctgtctttgagatcccgctctccagcgtctcccagtgtgca
nacgggaagaacgaggtgactgtggagtttcaccagaatgatgacgccgaggtgtccctc
atggaggtgcgcttctatgtgccgcccaacaccggagacgacggctcggaccctgtggag
gcgtttgctcagaatgttnctttcaaggcagatgtcattcaggctactggagacgctgtg
tgtatcttcaaagagcttcagtgccttacaccgagaggaaggtatgatatccgtatctac
cccaccttcctgcaccttcacggcaagacgcttgactacaagatcccttacaccaccgtc
ctccggctcttcctgctgccgnncaaggaccagaggcagatgttctttgtgatcagtctc
gacccgcccatcaaacagggtcagacgcgttatcatttcctcatcctcctcttctccaaa
gacgaagagctcagtcttgctctgaacatgagcgaggatgaggtggagaagcgttatgat
ggcaagctcagtaagaacatgtccgggccgctctacgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcccggaaactttcagggtcactcaggctctcag
tgtataacgtgtgcgtacaaaggcgagctcgggctgctgtatcctctggagcgaggcttc
atctacgtgcacaagccgccggttcacctgcgccgaggagatctcctgcgcgccaacttc
gccagaggaaccaccaccacccgctccttcgacttcgagatcgagaccaagcagaacaac
cagtacaccttcagcaacatcgagagggaagaatacgacaagctctttcgacttgccaac
gccaagaagctgaacatcaagaacagaggtttaaagaggagccgacggctggcagactct
gatgaggaccagcatgacgcttacnctgagaggatgaagcaggagggcaagatccgagag
gagggagacggcagcgacgagtcggagggagacagcgacgagtctttcaaccctggagaa
gaggatgacgacgccccagaagagtatgacagcaacgcttcggagagcgacagcgaggca
gatgatggagacagcgaggaagaaagcaggaagaagaaaccggaaaagaaacccaagaaa
gtggtgaaggagaagaaagagaggaagccacggaaagagaagaaggtgaaggacgccttg
tgctcccaagaggccgatgagcgctacatgctctggctgaacggcaaccgagagctaatc
aagagcgagaatcctgggatatcagtcaccgagatctccaagaaggctggagaaatgtgg
aagcagctgagcaaagaccgcaaagaggagtgggacaaaaaagctgaggaggccaagaaa
cagtacnagagagccatgaaagagtacagagagagcggaggagagagcggcgcctgctgc
caaagaaaaaagaagaagaaaggagggaaggtggaacctaagaagaagagtggaggagag
aaggagaaaaagaaggaaggaggaaacgagagctttaagagcaaagagttcatctccagc
gagagagagctcgtctga
DBGET
integrated database retrieval system
